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GCA_001873435.1 (Q48174)

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genome assembly
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    GCA_001873435.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Caldicellulosiruptor kronotskyensis
      16S Identity %
      28.327645051194537
      POCPu
      2.079290268921542
      G+C Difference (%)
      0.5499999999999972
      0 references
      Frankia asymbiotica
      16S Identity %
      27.500000000000004
      0 references
      Frankia soli
      16S Identity %
      27.0891364902507
      0 references
      Frankia irregularis
      16S Identity %
      26.648721399730825
      0 references
      Vampirovibrio chlorellavorus
      16S Identity %
      26.41509433962264
      POCPu
      1.338934103439223
      G+C Difference (%)
      15.740000000000002
      0 references
      Thermomarinilinea lacunifontana
      16S Identity %
      25.122807017543856
      0 references
      Nakamurella endophytica
      16S Identity %
      24.897400820793433
      POCPu
      1.0570026425066061
      G+C Difference (%)
      38.32
      0 references
      Blastococcus fimeti
      16S Identity %
      24.877365101611773
      POCPu
      1.2147416100473545
      G+C Difference (%)
      37.74
      0 references
      Sporichthya brevicatena
      16S Identity %
      24.861878453038674
      POCPu
      0.9271746459878624
      G+C Difference (%)
      35.79
      0 references
      Caldilinea tarbellica
      16S Identity %
      24.839400428265524
      0 references
      Nakamurella alba
      16S Identity %
      24.830393487109905
      POCPu
      0.9958899778691115
      G+C Difference (%)
      35.65
      0 references
      Frankia canadensis
      16S Identity %
      24.7972972972973
      POCPu
      0.689838153356328
      G+C Difference (%)
      36.74
      0 references
      Rhodococcus opacus
      16S Identity %
      24.743677375256322
      POCPu
      0.6767005016917513
      G+C Difference (%)
      31.720000000000006
      0 references
      Kineosporia corallincola
      16S Identity %
      24.63872832369942
      POCPu
      0.8019740900678594
      G+C Difference (%)
      35.220000000000006
      0 references
      Kineosporia babensis
      16S Identity %
      24.621733149931224
      POCPu
      0.6653577661431065
      G+C Difference (%)
      33.18
      0 references
      Caldicellulosiruptor owensensis
      16S Identity %
      24.573378839590443
      POCPu
      2.1745696164300816
      G+C Difference (%)
      0.21000000000000085
      0 references
      Aquihabitans daechungensis
      16S Identity %
      24.439775910364144
      0 references
      Blastococcus aggregatus
      16S Identity %
      24.380165289256198
      POCPu
      1.177336276674025
      G+C Difference (%)
      37.669999999999995
      0 references
      Cryptosporangium cibodasense
      16S Identity %
      24.140302613480056
      0 references
      Frankia inefficax
      16S Identity %
      24.05149051490515
      0 references
      Pelolinea submarina
      16S Identity %
      23.997326203208555
      POCPu
      1.6160626836434866
      G+C Difference (%)
      14.96
      0 references
      Anaerolinea thermophila
      16S Identity %
      23.9086635325722
      POCPu
      2.2418316241354637
      G+C Difference (%)
      18.200000000000003
      0 references
      Frankia alni
      16S Identity %
      23.84150436534587
      POCPu
      0.7615286983500211
      G+C Difference (%)
      37.18
      0 references
      Cryptosporangium aurantiacum
      16S Identity %
      23.825503355704697
      POCPu
      0.7161125319693095
      G+C Difference (%)
      35.54
      0 references
      Cryptosporangium phraense
      16S Identity %
      23.792862141357592
      POCPu
      0.727069351230425
      G+C Difference (%)
      35.940000000000005
      0 references
      Fodinicola feengrottensis
      16S Identity %
      23.735955056179776
      POCPu
      0.6842619745845552
      G+C Difference (%)
      30.96
      0 references
      Caldilinea aerophila
      16S Identity %
      23.710649698593436
      POCPu
      1.393188854489164
      G+C Difference (%)
      23.120000000000005
      0 references
      Microvenator marinus
      16S Identity %
      23.70718603089322
      POCPu
      1.077659938419432
      G+C Difference (%)
      19.560000000000002
      0 references
      Frankia nepalensis
      16S Identity %
      23.567335243553007
      POCPu
      0.6532559104106179
      G+C Difference (%)
      36.99
      0 references
      Frankia saprophytica
      16S Identity %
      23.525127458120902
      0 references
      Yinghuangia aomiensis
      16S Identity %
      23.461012311901506
      POCPu
      0.5550218806702956
      G+C Difference (%)
      36.02
      0 references
      Frankia elaeagni
      16S Identity %
      23.459539717891612
      0 references
      Yinghuangia soli
      16S Identity %
      23.379310344827587
      POCPu
      0.5815764876934262
      G+C Difference (%)
      36.4
      0 references
      Sporichthya polymorpha
      16S Identity %
      23.331039229181005
      POCPu
      0.9509993552546744
      G+C Difference (%)
      35.720000000000006
      0 references
      Yinghuangia seranimata
      16S Identity %
      23.270893371757925
      POCPu
      0.5931321540062434
      G+C Difference (%)
      36.830000000000005
      0 references
      Trujillonella endophytica
      16S Identity %
      23.25088339222615
      POCPu
      1.033315517548548
      G+C Difference (%)
      38.949999999999996
      0 references
      Actinomarinicola tropica
      16S Identity %
      23.244026068066617
      POCPu
      1.4579759862778732
      G+C Difference (%)
      36.910000000000004
      0 references
      Cryptosporangium minutisporangium
      16S Identity %
      23.193392980041295
      POCPu
      0.7390202702702703
      G+C Difference (%)
      35.53000000000001
      0 references
      Cryptosporangium japonicum
      16S Identity %
      23.193392980041295
      POCPu
      0.7280016881198564
      G+C Difference (%)
      36.26
      0 references
      Frankia torreyi
      16S Identity %
      22.950819672131146
      POCPu
      0.7181571815718157
      G+C Difference (%)
      36.669999999999995
      0 references
      Chloroflexus aurantiacus
      16S Identity %
      22.93207800941493
      POCPu
      1.5914622729825876
      G+C Difference (%)
      21.050000000000004
      0 references
      Yinghuangia catbensis
      16S Identity %
      22.913719943422915
      0 references
      Sphaerobacter thermophilus
      16S Identity %
      22.911051212938006
      POCPu
      1.8767939942592182
      G+C Difference (%)
      32.46
      0 references
      Blastococcus aurantiacus
      16S Identity %
      22.83072546230441
      POCPu
      1.1496531219028743
      G+C Difference (%)
      37.919999999999995
      0 references
      Chloroflexus islandicus
      16S Identity %
      22.76695768972465
      POCPu
      1.431888544891641
      G+C Difference (%)
      24.990000000000002
      0 references
      Frankia discariae
      16S Identity %
      22.69090909090909
      0 references
      Chloroflexus aggregans
      16S Identity %
      22.439353099730457
      POCPu
      1.6528925619834711
      G+C Difference (%)
      20.78
      0 references
      Nakamurella silvestris
      16S Identity %
      22.422874341610232
      POCPu
      1.1788175553137468
      G+C Difference (%)
      31.1
      0 references
      Herbidospora mongoliensis
      16S Identity %
      22.383922383922382
      POCPu
      0.6903353057199211
      G+C Difference (%)
      33.720000000000006
      0 references
      Frankia colletiae
      16S Identity %
      22.362869198312236
      0 references
      Parafrankia elaeagni
      POCPu
      0.8219559765951518
      G+C Difference (%)
      36.02
      0 references
      Pseudofrankia saprophytica
      POCPu
      0.6388738494856524
      G+C Difference (%)
      36.07
      0 references
      Pseudofrankia asymbiotica
      POCPu
      0.6300114547537228
      G+C Difference (%)
      36.29
      0 references
      Parafrankia irregularis
      POCPu
      0.6488332384746727
      G+C Difference (%)
      35.24
      0 references
      Pseudofrankia inefficax
      POCPu
      0.6833435021354485
      G+C Difference (%)
      36.660000000000004
      0 references
      Parafrankia soli
      POCPu
      0.6739890164752871
      G+C Difference (%)
      36.07
      0 references
      Parafrankia colletiae
      POCPu
      0.7366950336593421
      G+C Difference (%)
      35.75000000000001
      0 references
      Parafrankia discariae
      POCPu
      0.7050528789659225
      G+C Difference (%)
      36.71
      0 references
      CAZyme
      GH13
      Occurance
      2
      0 references
      GH130
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH57
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH18
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH23
      Occurance
      1
      0 references
      GT51
      Occurance
      3
      0 references
      GT13
      Occurance
      1
      0 references
      GT2
      Occurance
      21
      0 references
      GT4
      Occurance
      15
      0 references
      GT28
      Occurance
      4
      0 references
      GT39
      Occurance
      1
      0 references
      GT0
      Occurance
      2
      0 references
      GT26
      Occurance
      4
      0 references
      CBM50
      Occurance
      4
      0 references
      CBM13
      Occurance
      2
      0 references
      MAGs
      no MAG matches found
      0 references
       
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