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GCA_000043285.1 (Q43562)

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genome assembly
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    GCA_000043285.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Dickeya undicola
      16S Identity %
      25.439167208848406
      POCPu
      16.976900650370037
      G+C Difference (%)
      27.080000000000002
      0 references
      Pectobacterium fontis
      16S Identity %
      25.178919973975276
      POCPu
      17.591308368007397
      G+C Difference (%)
      23.84
      0 references
      Pectobacterium punjabense
      16S Identity %
      24.7074122236671
      POCPu
      15.541090317331163
      G+C Difference (%)
      23.290000000000003
      0 references
      Rouxiella badensis
      16S Identity %
      24.512353706111835
      POCPu
      13.47344411860541
      G+C Difference (%)
      25.44
      0 references
      Enterobacter pseudoroggenkampii
      16S Identity %
      24.47988904299584
      POCPu
      14.712153518123666
      G+C Difference (%)
      28.220000000000002
      0 references
      Pantoea allii
      16S Identity %
      24.347258485639685
      POCPu
      13.887871015023817
      G+C Difference (%)
      25.55
      0 references
      Chimaeribacter californicus
      16S Identity %
      24.324324324324326
      POCPu
      15.380047505938244
      G+C Difference (%)
      31.12
      0 references
      Serratia rubidaea
      16S Identity %
      24.32074221338635
      POCPu
      13.373570520965691
      G+C Difference (%)
      31.849999999999998
      0 references
      Symbiopectobacterium purcellii
      16S Identity %
      24.268054651919325
      POCPu
      14.331031908938236
      G+C Difference (%)
      25.16
      0 references
      Dickeya dadantii subsp. dadantii
      16S Identity %
      24.244415243101184
      0 references
      Sodalis praecaptivus
      16S Identity %
      24.23841059602649
      POCPu
      16.549295774647888
      G+C Difference (%)
      29.720000000000002
      0 references
      Enterobacter chengduensis
      16S Identity %
      24.20299284320104
      POCPu
      13.719735876742481
      G+C Difference (%)
      28.360000000000003
      0 references
      Ewingella americana
      16S Identity %
      24.185136897001303
      POCPu
      15.535143769968052
      G+C Difference (%)
      26.52
      0 references
      Cedecea davisae
      16S Identity %
      24.11764705882353
      POCPu
      14.96922771490967
      G+C Difference (%)
      26.580000000000002
      0 references
      Pectobacterium actinidiae
      16S Identity %
      24.054758800521512
      POCPu
      15.842396880771597
      G+C Difference (%)
      24.16
      0 references
      Pectobacterium cacticida
      16S Identity %
      24.002616088947022
      POCPu
      18.02705223880597
      G+C Difference (%)
      23.59
      0 references
      Edwardsiella anguillarum
      16S Identity %
      23.986013986013983
      POCPu
      15.744489428699953
      G+C Difference (%)
      30.960000000000004
      0 references
      Enterobacter chuandaensis
      16S Identity %
      23.95287958115183
      POCPu
      15.401785714285715
      G+C Difference (%)
      28.3
      0 references
      Enterobacter dykesii
      16S Identity %
      23.92438070404172
      POCPu
      15.90432228283676
      G+C Difference (%)
      28.470000000000002
      0 references
      Enterobacter quasiroggenkampii
      16S Identity %
      23.862158647594278
      POCPu
      15.086121560087113
      G+C Difference (%)
      28.31
      0 references
      Cronobacter malonaticus
      16S Identity %
      23.850197109067018
      POCPu
      15.846414934238439
      G+C Difference (%)
      29.470000000000002
      0 references
      Enterobacter quasimori
      16S Identity %
      23.828125
      0 references
      Pectobacterium versatile
      16S Identity %
      23.812621990891348
      POCPu
      15.492393915132105
      G+C Difference (%)
      24.51
      0 references
      Serratia inhibens
      16S Identity %
      23.797139141742523
      POCPu
      14.238892935178441
      G+C Difference (%)
      28.48
      0 references
      Edwardsiella ictaluri
      16S Identity %
      23.68766404199475
      POCPu
      17.87427417318859
      G+C Difference (%)
      30.180000000000003
      0 references
      Enterobacter quasihormaechei
      16S Identity %
      23.667100130039014
      POCPu
      15.855441821600166
      G+C Difference (%)
      28.529999999999998
      0 references
      Dickeya fangzhongdai
      16S Identity %
      23.6174365647365
      POCPu
      15.623087905364063
      G+C Difference (%)
      29.37
      0 references
      Serratia plymuthica
      16S Identity %
      23.435419440745672
      POCPu
      14.3646408839779
      G+C Difference (%)
      28.580000000000002
      0 references
      Kosakonia radicincitans
      16S Identity %
      23.387622149837135
      POCPu
      11.732796032238065
      G+C Difference (%)
      26.320000000000004
      0 references
      Pseudocitrobacter vendiensis
      16S Identity %
      23.35718932986337
      POCPu
      13.232217573221758
      G+C Difference (%)
      25.77
      0 references
      Pectobacterium brasiliense
      16S Identity %
      23.333333333333332
      POCPu
      15.803425774877649
      G+C Difference (%)
      24.779999999999998
      0 references
      Serratia marcescens
      16S Identity %
      23.302872062663184
      POCPu
      14.459636636074173
      G+C Difference (%)
      32.400000000000006
      0 references
      Pectobacterium aroidearum
      16S Identity %
      23.26797385620915
      POCPu
      14.699753741238872
      G+C Difference (%)
      24.24
      0 references
      Pectobacterium wasabiae
      16S Identity %
      23.2527759634226
      POCPu
      14.790751003248614
      G+C Difference (%)
      23.169999999999998
      0 references
      Serratia ficaria
      16S Identity %
      23.210702341137125
      POCPu
      14.547862277714717
      G+C Difference (%)
      32.68000000000001
      0 references
      Cronobacter condimenti
      16S Identity %
      23.192182410423452
      POCPu
      15.729144555296115
      G+C Difference (%)
      28.400000000000002
      0 references
      Pectobacterium betavasculorum
      16S Identity %
      23.137254901960784
      POCPu
      15.788381742738588
      G+C Difference (%)
      23.779999999999998
      0 references
      Dickeya oryzae
      16S Identity %
      23.09694209499024
      POCPu
      16.52569941444372
      G+C Difference (%)
      25.95
      0 references
      Serratia entomophila
      16S Identity %
      23.08707124010554
      POCPu
      14.793122992631776
      G+C Difference (%)
      31.540000000000003
      0 references
      Serratia odorifera
      16S Identity %
      23.03595206391478
      POCPu
      12.988060664730558
      G+C Difference (%)
      28.669999999999998
      0 references
      Pectobacterium quasiaquaticum
      16S Identity %
      22.5113858165257
      0 references
      Pectobacterium parmentieri
      16S Identity %
      22.496749024707412
      POCPu
      15.106093050418531
      G+C Difference (%)
      23.02
      0 references
      Dickeya lacustris
      16S Identity %
      22.446324007807416
      POCPu
      16.73576260091643
      G+C Difference (%)
      25.73
      0 references
      Dickeya parazeae
      16S Identity %
      22.446324007807416
      0 references
      Pectobacterium polaris
      16S Identity %
      22.316200390370852
      POCPu
      15.784093232467796
      G+C Difference (%)
      24.66
      0 references
      Serratia liquefaciens
      16S Identity %
      22.149837133550488
      POCPu
      14.072455852903696
      G+C Difference (%)
      27.95
      0 references
      Providencia sneebia
      16S Identity %
      21.824104234527688
      POCPu
      17.059426229508194
      G+C Difference (%)
      7.330000000000002
      0 references
      Enterobacter hormaechei
      POCPu
      14.73360261588767
      G+C Difference (%)
      27.720000000000002
      0 references
      Dickeya dadantii
      POCPu
      14.750101584721659
      G+C Difference (%)
      28.900000000000002
      0 references
      Pectobacterium carotovorum
      POCPu
      15.986814997939844
      G+C Difference (%)
      24.52
      0 references
      CAZyme
      GH13
      Occurance
      2
      0 references
      GH6
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH23
      Occurance
      2
      0 references
      GT13
      Occurance
      2
      0 references
      GT51
      Occurance
      2
      0 references
      GT4
      Occurance
      6
      0 references
      GT22
      Occurance
      1
      0 references
      GT28
      Occurance
      4
      0 references
      GT30
      Occurance
      3
      0 references
      GT2
      Occurance
      2
      0 references
      GT19
      Occurance
      1
      0 references
      GT9
      Occurance
      2
      0 references
      CE4
      Occurance
      1
      0 references
      CE9
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CBM20
      Occurance
      1
      0 references
      CBM13
      Occurance
      2
      0 references
      CBM50
      Occurance
      6
      0 references
      CBM5
      Occurance
      1
      0 references
      Pathway
      MAGs
      no MAG matches found
      0 references
       
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