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GCA_001787405.1 (Q316009)

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genome assembly
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    GCA_001787405.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Frankia discariae
      16S Identity %
      27.606461086637296
      0 references
      Frankia inefficax
      16S Identity %
      27.546138072453864
      0 references
      Frankia saprophytica
      16S Identity %
      27.1523178807947
      0 references
      Actinomadura kijaniata
      16S Identity %
      27.027027027027028
      POCPu
      0.5536464299350897
      G+C Difference (%)
      34.71000000000001
      0 references
      Frankia colletiae
      16S Identity %
      26.756564939673527
      0 references
      Longivirga aurantiaca
      16S Identity %
      26.609442060085836
      0 references
      Quadrisphaera setariae
      16S Identity %
      26.297085998578535
      POCPu
      1.0274612366897067
      G+C Difference (%)
      36.32000000000001
      0 references
      Sporichthya polymorpha
      16S Identity %
      25.977653631284912
      POCPu
      1.0809911857641776
      G+C Difference (%)
      32.900000000000006
      0 references
      Quadrisphaera oryzae
      16S Identity %
      25.837988826815643
      0 references
      Kineosporia rhizophila
      16S Identity %
      25.81967213114754
      POCPu
      0.6687697160883281
      G+C Difference (%)
      31.790000000000006
      0 references
      Gordonia defluvii
      16S Identity %
      25.712347354138398
      POCPu
      1.323491982692797
      G+C Difference (%)
      28.909999999999997
      0 references
      Blastococcus fimeti
      16S Identity %
      25.71225071225071
      POCPu
      1.307329618516931
      G+C Difference (%)
      34.92
      0 references
      Gordonia malaquae
      16S Identity %
      25.674740484429066
      POCPu
      1.164856860809477
      G+C Difference (%)
      27.930000000000007
      0 references
      Kineosporia babensis
      16S Identity %
      25.64640111809923
      POCPu
      0.5681185251197505
      G+C Difference (%)
      30.36
      0 references
      Cryptosporangium arvum
      16S Identity %
      25.630252100840334
      POCPu
      0.6292662116040956
      G+C Difference (%)
      33.22
      0 references
      Kineosporia corallincola
      16S Identity %
      25.607064017660043
      POCPu
      0.6823351023502654
      G+C Difference (%)
      32.400000000000006
      0 references
      Actinoalloteichus hymeniacidonis
      16S Identity %
      25.5420054200542
      POCPu
      0.8059316569954869
      G+C Difference (%)
      29.61
      0 references
      Blastococcus aurantiacus
      16S Identity %
      25.524222704266087
      POCPu
      1.2978986402966626
      G+C Difference (%)
      35.099999999999994
      0 references
      Frankia canadensis
      16S Identity %
      25.47814207650273
      POCPu
      0.8030488634816932
      G+C Difference (%)
      33.92
      0 references
      Kineosporia aurantiaca
      16S Identity %
      25.47683923705722
      POCPu
      0.5781002040353661
      G+C Difference (%)
      31.08
      0 references
      Kineococcus rubinsiae
      16S Identity %
      25.408719346049047
      POCPu
      0.9595484477892756
      G+C Difference (%)
      35.69
      0 references
      Kineococcus xinjiangensis
      16S Identity %
      25.24127691165553
      POCPu
      1.149889045793827
      G+C Difference (%)
      36.18000000000001
      0 references
      Nakamurella alba
      16S Identity %
      25.223983459682977
      POCPu
      0.8475957620211898
      G+C Difference (%)
      32.83
      0 references
      Allokutzneria oryzae
      16S Identity %
      25.070224719101127
      0 references
      Kineosporia mikuniensis
      16S Identity %
      25.01708817498291
      0 references
      Kibdelosporangium phytohabitans
      16S Identity %
      25.01690331304936
      POCPu
      0.5683775404753703
      G+C Difference (%)
      29.97
      0 references
      Kineococcus siccus
      16S Identity %
      24.926900584795323
      POCPu
      1.0611122027903321
      G+C Difference (%)
      36.629999999999995
      0 references
      Sporichthya brevicatena
      16S Identity %
      24.894810659186536
      POCPu
      1.1322069325901412
      G+C Difference (%)
      32.97
      0 references
      Yinghuangia aomiensis
      16S Identity %
      24.878724878724878
      POCPu
      0.610154717803443
      G+C Difference (%)
      33.2
      0 references
      Kibdelosporangium metalli
      16S Identity %
      24.86413043478261
      0 references
      Tepidiforma bonchosmolovskayae
      16S Identity %
      24.7450713800136
      POCPu
      1.877133105802048
      G+C Difference (%)
      31.409999999999997
      0 references
      Kineosporia mesophila
      16S Identity %
      24.67438494934877
      POCPu
      0.7119741100323626
      G+C Difference (%)
      30.960000000000008
      0 references
      Frankia asymbiotica
      16S Identity %
      24.624829467939975
      0 references
      Tepidiforma thermophila
      16S Identity %
      24.60910944935418
      POCPu
      1.8998272884283247
      G+C Difference (%)
      30.900000000000006
      0 references
      Tepidiforma flava
      16S Identity %
      24.573378839590443
      POCPu
      1.7375033413525796
      G+C Difference (%)
      32.59
      0 references
      Frankia alni
      16S Identity %
      24.37202987101154
      POCPu
      0.8985507246376812
      G+C Difference (%)
      34.36
      0 references
      Cryptosporangium cibodasense
      16S Identity %
      24.30167597765363
      0 references
      Cryptosporangium japonicum
      16S Identity %
      24.162011173184357
      POCPu
      0.6137611715300959
      G+C Difference (%)
      33.44
      0 references
      Cryptosporangium phraense
      16S Identity %
      24.022743425728503
      POCPu
      0.6400731512172819
      G+C Difference (%)
      33.120000000000005
      0 references
      Allokutzneria multivorans
      16S Identity %
      23.796610169491526
      POCPu
      0.78125
      G+C Difference (%)
      31.349999999999994
      0 references
      Nakamurella endophytica
      16S Identity %
      23.72999304105776
      POCPu
      0.9790483649892304
      G+C Difference (%)
      35.5
      0 references
      Yinghuangia catbensis
      16S Identity %
      23.567335243553007
      0 references
      Frankia elaeagni
      16S Identity %
      23.29075882794891
      0 references
      Streptoalloteichus tenebrarius
      16S Identity %
      23.26241134751773
      POCPu
      0.8760951188986232
      G+C Difference (%)
      34.08
      0 references
      Frankia soli
      16S Identity %
      23.26071679550246
      0 references
      Williamsia serinedens
      16S Identity %
      23.247744621790424
      POCPu
      0.9538641230290054
      G+C Difference (%)
      31.930000000000007
      0 references
      Yinghuangia seranimata
      16S Identity %
      23.24561403508772
      POCPu
      0.6582439749442617
      G+C Difference (%)
      34.010000000000005
      0 references
      Frankia torreyi
      16S Identity %
      23.015873015873016
      POCPu
      0.7511475865906245
      G+C Difference (%)
      33.849999999999994
      0 references
      Frankia irregularis
      16S Identity %
      22.847457627118644
      0 references
      Nakamurella silvestris
      16S Identity %
      22.713414634146343
      POCPu
      0.9581063310163441
      G+C Difference (%)
      28.28
      0 references
      Parafrankia elaeagni
      POCPu
      0.9016745384285102
      G+C Difference (%)
      33.2
      0 references
      Pseudofrankia saprophytica
      POCPu
      0.6413091552410438
      G+C Difference (%)
      33.25
      0 references
      Pseudofrankia asymbiotica
      POCPu
      0.737791310457899
      G+C Difference (%)
      33.47
      0 references
      Parafrankia irregularis
      POCPu
      0.7563416336979288
      G+C Difference (%)
      32.42
      0 references
      Pseudofrankia inefficax
      POCPu
      0.7746126936531734
      G+C Difference (%)
      33.84
      0 references
      Parafrankia soli
      POCPu
      0.728807057920982
      G+C Difference (%)
      33.25
      0 references
      Parafrankia colletiae
      POCPu
      0.7940640458214008
      G+C Difference (%)
      32.93000000000001
      0 references
      Parafrankia discariae
      POCPu
      0.8435993572576326
      G+C Difference (%)
      33.89
      0 references
      CAZyme
      GH13
      Occurance
      1
      0 references
      GH6
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH18
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GH23
      Occurance
      1
      0 references
      GT51
      Occurance
      3
      0 references
      GT13
      Occurance
      1
      0 references
      GT105
      Occurance
      1
      0 references
      GT4
      Occurance
      18
      0 references
      GT2
      Occurance
      23
      0 references
      GT0
      Occurance
      2
      0 references
      GT39
      Occurance
      1
      0 references
      GT28
      Occurance
      3
      0 references
      GT26
      Occurance
      4
      0 references
      CBM50
      Occurance
      4
      0 references
      CBM13
      Occurance
      2
      0 references
      MAGs
      no MAG matches found
      0 references
       
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