GCA_016187565.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanothermococcus thermolithotrophicus
Comparison to close relatives: Methanofervidicoccus abyssi
Comparison to close relatives: Methanothermococcus okinawensis
Comparison to close relatives: Methanococcus aeolicus
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Methanocaldococcus bathoardescens
Comparison to close relatives: Methanocaldococcus infernus
Comparison to close relatives: Methanocaldococcus jannaschii
Comparison to close relatives: Methanocaldococcus lauensis
Comparison to close relatives: Methanocaldococcus villosus
Comparison to close relatives: Methanocaldococcus fervens
Comparison to close relatives: Methanococcus vannielii
Comparison to close relatives: Methanocaldococcus indicus
Comparison to close relatives: Methanosphaera stadtmanae
Comparison to close relatives: Methanosphaera cuniculi
Comparison to close relatives: Methanobrevibacter smithii
Comparison to close relatives: Methanobacterium subterraneum
Comparison to close relatives: Methanobacterium movens
Comparison to close relatives: Thermococcus cleftensis
Comparison to close relatives: Thermococcus piezophilus
Comparison to close relatives: Thermococcus thermotolerans
Comparison to close relatives: Methanobacterium bryantii
Comparison to close relatives: Methanobacterium alcaliphilum
Comparison to close relatives: Palaeococcus helgesonii
Comparison to close relatives: Methanobacterium flexile
Comparison to close relatives: Thermococcus eurythermalis
Comparison to close relatives: Thermococcus gammatolerans
Comparison to close relatives: Thermococcus camini
Comparison to close relatives: Thermococcus henrietii
Comparison to close relatives: Methanocaldococcus vulcanius
Comparison to close relatives: Methanothermus sociabilis
Comparison to close relatives: Thermococcus celericrescens
Comparison to close relatives: Methanothermobacter marburgensis
Comparison to close relatives: Methanobacterium veterum
Comparison to close relatives: Thermococcus kodakarensis
Comparison to close relatives: Methanobacterium paludis
Comparison to close relatives: Thermococcus zilligii
Comparison to close relatives: Methanothermobacter thermautotrophicus
Comparison to close relatives: Methanothermobacter thermoflexus
Comparison to close relatives: Methanobacterium oryzae
Comparison to close relatives: Methanobacterium congolense
Comparison to close relatives: Methanobacterium palustre
Comparison to close relatives: Methanothermobacter wolfei
Comparison to close relatives: Methanobacterium formicicum
Comparison to close relatives: Methanobacterium ferruginis
Comparison to close relatives: Methanobacterium arcticum
Comparison to close relatives: Methanococcus voltae
Comparison to close relatives: Methanobacterium movilense
Comparison to close relatives: Methanobacterium kanagiense
Comparison to close relatives: Methanothermobacter wolfeii
Carbon source: starch
CAZyme: GH57
CAZyme: GH28
CAZyme: GH13
CAZyme: GH0
CAZyme: GH16
CAZyme: GT66
CAZyme: GT4
CAZyme: GT3
CAZyme: GT2
CAZyme: GT0
CAZyme: GT22
CAZyme: GT5
CAZyme: GT1
CAZyme: GT81
CAZyme: GT26
CAZyme: PL12
CAZyme: CE14
CAZyme: CBM50
CAZyme: CBM48
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Proline biosynthesis, glutamate => proline
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Pathway: Ornithine biosynthesis, glutamate => ornithine

GCA_016187565.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_016187565.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_016187565.1 (Pathway)
Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC
Metabolic module: M00091

GCA_016187565.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_016187565.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_016187565.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_016187565.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_016187565.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_016187565.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_016187565.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_016187565.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_016187565.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_016187565.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_016187565.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_016187565.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_016187565.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_016187565.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_016187565.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_016187565.1 (MAGs)
MAGs: no MAG matches found