GCA_020054475.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methanococcus vannielii
Comparison to close relatives: Methanothermococcus thermolithotrophicus
Comparison to close relatives: Methanobacterium alcaliphilum
Comparison to close relatives: Methanococcus aeolicus
Comparison to close relatives: Methanobacterium paludis
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Methanobacterium arcticum
Comparison to close relatives: Methanobacterium lacus
Comparison to close relatives: Methanothermococcus okinawensis
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanobacterium veterum
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanobacterium congolense
Comparison to close relatives: Methanobacterium aggregans
Comparison to close relatives: Methanosphaera stadtmanae
Comparison to close relatives: Methanogenium cariaci
Comparison to close relatives: Methanobacterium movilense
Comparison to close relatives: Methanobacterium bryantii
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanobacterium petrolearium
Comparison to close relatives: Methanoculleus palmolei
Comparison to close relatives: Methanobacterium subterraneum
Comparison to close relatives: Methanobrevibacter gottschalkii
Comparison to close relatives: Methanogenium frigidum
Comparison to close relatives: Methanobacterium oryzae
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Methanosphaera cuniculi
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Methanobacterium ferruginis
Comparison to close relatives: Methanoculleus taiwanensis
Comparison to close relatives: Methanobrevibacter ruminantium
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanobacterium kanagiense
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanobrevibacter smithii
Carbon source: starch
CAZyme: GH133
CAZyme: GH101
CAZyme: GH13
CAZyme: GH57
CAZyme: GH38
CAZyme: GH16
CAZyme: GH0
CAZyme: GT66
CAZyme: GT2
CAZyme: GT7
CAZyme: GT22
CAZyme: GT35
CAZyme: GT4
CAZyme: GT81
CAZyme: CBM48
CAZyme: CBM6
CAZyme: CBM32
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Pathway: Coenzyme A biosynthesis, pantothenate => CoA

GCA_020054475.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_020054475.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_020054475.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_020054475.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_020054475.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_020054475.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_020054475.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_020054475.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_020054475.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_020054475.1 (Pathway)
Pathway: Glycolysis (preparatory phase)
Metabolic module: MF0067

GCA_020054475.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_020054475.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_020054475.1 (Pathway)
Pathway: Hydrogen metabolism
Metabolic module: MF0098

GCA_020054475.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_020054475.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 2.4
Relative abundance (%): 0.05

GCA_020054475.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.03

GCA_020054475.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.5
Relative abundance (%): 1.59

GCA_020054475.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 27.4
Relative abundance (%): 0.34

GCA_020054475.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_020054475.1 (MAGs)
MAGs: no MAG matches found