GCA_013390375.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Sulfuracidifex metallicus
Comparison to close relatives: Methanosarcina flavescens
Comparison to close relatives: Methanosarcina barkeri
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanosarcina lacustris
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanobacterium alcaliphilum
Comparison to close relatives: Methanobacterium movens
Comparison to close relatives: Ignisphaera aggregans
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Caldisphaera lagunensis
Comparison to close relatives: Sulfophobococcus zilligii
Comparison to close relatives: Methanobacterium oryzae
Comparison to close relatives: Nitrosopumilus zosterae
Comparison to close relatives: Saccharolobus caldissimus
Comparison to close relatives: Staphylothermus hellenicus
Comparison to close relatives: Nitrosarchaeum koreense
Comparison to close relatives: Nitrosopumilus maritimus
Comparison to close relatives: Desulfurococcus mucosus
Comparison to close relatives: Thermofilum pendens
Comparison to close relatives: Thermofilum uzonense
Comparison to close relatives: Methanobrevibacter cuticularis
Comparison to close relatives: Conexivisphaera calida
Comparison to close relatives: Pyrodictium occultum
Comparison to close relatives: Pyrofollis japonicus
Comparison to close relatives: Thermosphaera aggregans
Comparison to close relatives: Pyrodictium delaneyi
Comparison to close relatives: Methanosarcina soligelidi
Comparison to close relatives: Desulfurococcus amylolyticus
Comparison to close relatives: Methanobrevibacter ruminantium
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Caldivirga maquilingensis
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanolobus taylorii
Comparison to close relatives: Methanosarcina horonobensis
Comparison to close relatives: Thermofilum adornatum
Comparison to close relatives: Nitrososphaera viennensis
Comparison to close relatives: Fervidicoccus fontis
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanobrevibacter acididurans
Comparison to close relatives: Nitrosopumilus piranensis
Comparison to close relatives: Methanosphaera cuniculi
Comparison to close relatives: Nitrosopumilus cobalaminigenes
Comparison to close relatives: Methanosphaera stadtmanae
Comparison to close relatives: Nitrosopumilus oxyclinae
Comparison to close relatives: Nitrosopumilus adriaticus
Comparison to close relatives: Nitrosopumilus ureiphilus
Comparison to close relatives: Thermogladius calderae
Comparison to close relatives: Methanococcus aeolicus
CAZyme: GH101
CAZyme: GH13
CAZyme: GH135
CAZyme: GH16
CAZyme: GH0
CAZyme: GT7
CAZyme: GT66
CAZyme: GT2
CAZyme: GT22
CAZyme: GT4
CAZyme: GT1
CAZyme: GT51
CAZyme: GT20
CAZyme: CBM5
CAZyme: CBM2
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD

GCA_013390375.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_013390375.1 (Pathway)
Pathway: F420 biosynthesis, archaea
Metabolic module: M00378

GCA_013390375.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_013390375.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_013390375.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_013390375.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_013390375.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_013390375.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_013390375.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 1
Relative abundance (%): 0.66

GCA_013390375.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.02

GCA_013390375.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 17.2
Relative abundance (%): 1.63

GCA_013390375.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 11.9
Relative abundance (%): 2.03

GCA_013390375.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013390375.1 (MAGs)
MAGs: no MAG matches found