GCA_013329355.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanothermobacter marburgensis
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanothermobacter thermoflexus
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanolobus halotolerans
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanobacterium alcaliphilum
Comparison to close relatives: Methanocella paludicola
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanothermobacter thermautotrophicus
Comparison to close relatives: Methanothermobacter defluvii
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanocella arvoryzae
Comparison to close relatives: Methanothermobacter thermophilus
Comparison to close relatives: Methanococcoides alaskense
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanobacterium arcticum
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanolobus psychrotolerans
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Methanosarcina acetivorans
Comparison to close relatives: Methanosalsum natronophilum
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Methanosarcina horonobensis
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanolobus oregonensis
Comparison to close relatives: Methanolobus taylorii
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanosarcina mazei
Comparison to close relatives: Methanosarcina soligelidi
Comparison to close relatives: Methanosarcina spelaei
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Methanosarcina flavescens
Comparison to close relatives: Methanosarcina thermophila
Carbon source: starch
CAZyme: GH57
CAZyme: GH13
CAZyme: GH101
CAZyme: GH77
CAZyme: GH0
CAZyme: GH1
CAZyme: GT66
CAZyme: GT4
CAZyme: GT2
CAZyme: GT0
CAZyme: GT35
CAZyme: CE4
CAZyme: CE1
CAZyme: CBM50
CAZyme: CBM48
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: Triacylglycerol biosynthesis
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD

GCA_013329355.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_013329355.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_013329355.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_013329355.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_013329355.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_013329355.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_013329355.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 17.1
Relative abundance (%): 0.2

GCA_013329355.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 21.1
Relative abundance (%): 0.89

GCA_013329355.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.16

GCA_013329355.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_013329355.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.03

GCA_013329355.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_013329355.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.01

GCA_013329355.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 2.9
Relative abundance (%): 2.04

GCA_013329355.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_013329355.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013329355.1 (MAGs)
MAGs: no MAG matches found