GCA_013180605.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanolobus chelungpuianus
Comparison to close relatives: Methanolobus halotolerans
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Methanolobus psychrotolerans
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanohalophilus levihalophilus
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanolobus oregonensis
Comparison to close relatives: Methanosarcina mazei
Comparison to close relatives: Methanolobus taylorii
Comparison to close relatives: Methanosarcina flavescens
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanosarcina acetivorans
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanosarcina lacustris
Comparison to close relatives: Methanosarcina soligelidi
Comparison to close relatives: Methanolobus profundi
Comparison to close relatives: Methanosarcina barkeri
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanosalsum natronophilum
Comparison to close relatives: Methanosarcina horonobensis
Comparison to close relatives: Methanosarcina spelaei
Comparison to close relatives: Methanoculleus taiwanensis
Comparison to close relatives: Methanoculleus palmolei
Comparison to close relatives: Archaeoglobus veneficus
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Archaeoglobus sulfaticallidus
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanolinea mesophila
Comparison to close relatives: Archaeoglobus infectus
Comparison to close relatives: Methanoculleus thermophilus
Comparison to close relatives: Methanofollis liminatans
Comparison to close relatives: Archaeoglobus fulgidus
CAZyme: GH38
CAZyme: GH6
CAZyme: GH13
CAZyme: GH105
CAZyme: GH130
CAZyme: GH0
CAZyme: GT66
CAZyme: GT7
CAZyme: GT13
CAZyme: GT4
CAZyme: GT2
CAZyme: GT0
CAZyme: GT55
CAZyme: CE9
CAZyme: CBM50
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Proline biosynthesis, glutamate => proline
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Pathway: Coenzyme A biosynthesis, pantothenate => CoA

GCA_013180605.1 (Pathway)
Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA
Metabolic module: M00422

GCA_013180605.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_013180605.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_013180605.1 (Pathway)
Pathway: Heme biosynthesis, archaea, siroheme => heme
Metabolic module: M00847

GCA_013180605.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_013180605.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_013180605.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_013180605.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_013180605.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_013180605.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCA_013180605.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.04

GCA_013180605.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_013180605.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1.8
Relative abundance (%): 1.61

GCA_013180605.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_013180605.1 (MAGs)
MAGs: no MAG matches found