GCA_005888745.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Conexivisphaera calida
Comparison to close relatives: Acidilobus saccharovorans
Comparison to close relatives: Pyrobaculum calidifontis
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Thermoproteus tenax
Comparison to close relatives: Thermococcus chitonophagus
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Pyrobaculum igneiluti
Comparison to close relatives: Palaeococcus helgesonii
Comparison to close relatives: Thermoproteus uzoniensis
Comparison to close relatives: Thermococcus pacificus
Comparison to close relatives: Pyrobaculum ferrireducens
Comparison to close relatives: Pyrobaculum neutrophilum
Comparison to close relatives: Thermoproteus thermophilus
Comparison to close relatives: Pyrococcus kukulkanii
Comparison to close relatives: Pyrobaculum oguniense
Comparison to close relatives: Pyrococcus furiosus
Comparison to close relatives: Thermococcus fumicolans
Comparison to close relatives: Thermococcus stetteri
Comparison to close relatives: Pyrococcus horikoshii
Comparison to close relatives: Pyrococcus glycovorans
Comparison to close relatives: Methanocaldococcus infernus
Comparison to close relatives: Pyrococcus woesei
Comparison to close relatives: Methanocaldococcus fervens
Comparison to close relatives: Pyrobaculum organotrophum
Comparison to close relatives: Methanocaldococcus bathoardescens
Comparison to close relatives: Pyrococcus yayanosii
Comparison to close relatives: Methanocaldococcus jannaschii
Comparison to close relatives: Pyrobaculum islandicum
Comparison to close relatives: Methanocaldococcus villosus
Comparison to close relatives: Methanofervidicoccus abyssi
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Geoglobus acetivorans
Comparison to close relatives: Archaeoglobus profundus
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanolobus oregonensis
Comparison to close relatives: Methanomethylovorans uponensis
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanolobus halotolerans
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanosalsum natronophilum
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Halovenus rubra
CAZyme: GH15
CAZyme: GH101
CAZyme: GH13
CAZyme: GH105
CAZyme: GH0
CAZyme: GH16
CAZyme: GH19
CAZyme: GH109
CAZyme: GT7
CAZyme: GT66
CAZyme: GT20
CAZyme: GT2
CAZyme: GT1
CAZyme: GT4
CAZyme: GT51
CAZyme: CE14
CAZyme: CE4
CAZyme: CBM5
CAZyme: CBM50
CAZyme: CBM2
CAZyme: CBM48
Pathway: Glycolysis, core module involving three-carbon compounds
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

GCA_005888745.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_005888745.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_005888745.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_005888745.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_005888745.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_005888745.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_005888745.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_005888745.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_005888745.1 (Pathway)
Pathway: Fumarate reductase, prokaryotes
Metabolic module: M00150

GCA_005888745.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_005888745.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_005888745.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_005888745.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_005888745.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_005888745.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_005888745.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_005888745.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_005888745.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_005888745.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_005888745.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_005888745.1 (Pathway)
Pathway: 4-aminobutyrate degradation
Metabolic module: MF0076

GCA_005888745.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 1.5
Relative abundance (%): 0.14

GCA_005888745.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 1
Relative abundance (%): 0.01

GCA_005888745.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.02

GCA_005888745.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.01

GCA_005888745.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_005888745.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005888745.1 (MAGs)
MAGs: no MAG matches found