GCA_005878955.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Archaeoglobus neptunius
Comparison to close relatives: Methermicoccus shengliensis
Comparison to close relatives: Picrophilus torridus
Comparison to close relatives: Archaeoglobus fulgidus
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Thermococcus eurythermalis
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Thermococcus litoralis
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Thermococcus aegaeus
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Thermococcus piezophilus
Comparison to close relatives: Thermococcus paralvinellae
Comparison to close relatives: Thermococcus acidaminovorans
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Thermococcus zilligii
Comparison to close relatives: Thermococcus pacificus
Comparison to close relatives: Thermococcus cleftensis
Comparison to close relatives: Thermococcus henrietii
Comparison to close relatives: Thermococcus kodakarensis
Comparison to close relatives: Thermococcus nautili
Comparison to close relatives: Thermococcus thermotolerans
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Thermococcus profundus
Comparison to close relatives: Thermococcus gorgonarius
Comparison to close relatives: Geoglobus acetivorans
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Geoglobus ahangari
Comparison to close relatives: Thermococcus gammatolerans
Comparison to close relatives: Thermococcus stetteri
Comparison to close relatives: Thermococcus fumicolans
Comparison to close relatives: Archaeoglobus sulfaticallidus
Comparison to close relatives: Thermococcus barossii
Comparison to close relatives: Thermococcus waiotapuensis
Comparison to close relatives: Thermococcus peptonophilus
Comparison to close relatives: Thermococcus coalescens
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Thermococcus celer
Comparison to close relatives: Thermococcus siculi
Comparison to close relatives: Thermococcus celericrescens
Comparison to close relatives: Palaeococcus pacificus
Comparison to close relatives: Thermococcus camini
CAZyme: GH0
CAZyme: GH57
CAZyme: GH13
CAZyme: GH19
CAZyme: GH16
CAZyme: GT66
CAZyme: GT7
CAZyme: GT2
CAZyme: GT84
CAZyme: GT4
CAZyme: GT5
CAZyme: GT1
CAZyme: GT21
CAZyme: GT51
CAZyme: CE14
CAZyme: CE4
CAZyme: CBM50
CAZyme: CBM32
CAZyme: CBM35
CAZyme: CBM8
CAZyme: CBM5
CAZyme: CBM2
CAZyme: CBM13
CAZyme: CBM1
Pathway: Glycolysis, core module involving three-carbon compounds
Pathway: PRPP biosynthesis, ribose 5P => PRPP

GCA_005878955.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_005878955.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_005878955.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_005878955.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_005878955.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_005878955.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_005878955.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_005878955.1 (Pathway)
Pathway: Fumarate reductase, prokaryotes
Metabolic module: M00150

GCA_005878955.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_005878955.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_005878955.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_005878955.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_005878955.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_005878955.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_005878955.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_005878955.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_005878955.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_005878955.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_005878955.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_005878955.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_005878955.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_005878955.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_005878955.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_005878955.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_005878955.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.7
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.16

GCA_005878955.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.03

GCA_005878955.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_005878955.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878955.1 (MAGs)
MAGs: no MAG matches found