GCA_005878375.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanomassiliicoccus luminyensis
Comparison to close relatives: Methanomethylophilus alvi
Comparison to close relatives: Thermogymnomonas acidicola
Comparison to close relatives: Cuniculiplasma divulgatum
Comparison to close relatives: Ferroglobus placidus
Comparison to close relatives: Archaeoglobus neptunius
Comparison to close relatives: Methanocaldococcus infernus
Comparison to close relatives: Thermococcus atlanticus
Comparison to close relatives: Archaeoglobus fulgidus
Comparison to close relatives: Thermococcus litoralis
Comparison to close relatives: Methanocaldococcus jannaschii
Comparison to close relatives: Methanocaldococcus bathoardescens
Comparison to close relatives: Thermococcus eurythermalis
Comparison to close relatives: Methanocaldococcus fervens
Comparison to close relatives: Thermococcus pacificus
Comparison to close relatives: Thermoplasma volcanium
Comparison to close relatives: Thermococcus piezophilus
Comparison to close relatives: Thermococcus cleftensis
Comparison to close relatives: Geoglobus acetivorans
Comparison to close relatives: Thermococcus henrietii
Comparison to close relatives: Thermococcus kodakarensis
Comparison to close relatives: Thermococcus profundus
Comparison to close relatives: Thermococcus zilligii
Comparison to close relatives: Thermococcus waiotapuensis
Comparison to close relatives: Thermoplasma acidophilum
Comparison to close relatives: Thermococcus gorgonarius
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Thermococcus thermotolerans
Comparison to close relatives: Thermococcus gammatolerans
Comparison to close relatives: Thermococcus fumicolans
Comparison to close relatives: Archaeoglobus veneficus
Comparison to close relatives: Geoglobus ahangari
Comparison to close relatives: Thermococcus stetteri
Comparison to close relatives: Thermococcus peptonophilus
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Thermococcus coalescens
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Thermococcus barossii
Comparison to close relatives: Picrophilus torridus
Comparison to close relatives: Methanotorris igneus
Comparison to close relatives: Thermococcus celericrescens
Comparison to close relatives: Thermococcus acidaminovorans
Comparison to close relatives: Archaeoglobus sulfaticallidus
Comparison to close relatives: Thermococcus siculi
Comparison to close relatives: Thermococcus camini
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Picrophilus oshimae
Comparison to close relatives: Thermococcus indicus
Comparison to close relatives: Thermococcus aciditolerans
CAZyme: GH57
CAZyme: GH19
CAZyme: GH0
CAZyme: GH16
CAZyme: GT66
CAZyme: GT7
CAZyme: GT4
CAZyme: GT2
CAZyme: GT1
CAZyme: GT51
CAZyme: CE4
CAZyme: CBM50
CAZyme: CBM32
CAZyme: CBM5
CAZyme: CBM2
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Cysteine biosynthesis, serine => cysteine
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: beta-Oxidation, acyl-CoA synthesis
Pathway: Acylglycerol degradation
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Pathway: Arginine biosynthesis, ornithine => arginine

GCA_005878375.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_005878375.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_005878375.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_005878375.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_005878375.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_005878375.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_005878375.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_005878375.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_005878375.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_005878375.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_005878375.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_005878375.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_005878375.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_005878375.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_005878375.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.08

GCA_005878375.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.02

GCA_005878375.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_005878375.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_005878375.1 (MAGs)
MAGs: no MAG matches found