GCA_003558335.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanobacterium lacus
Comparison to close relatives: Methanobacterium aarhusense
Comparison to close relatives: Thermococcus sibiricus
Comparison to close relatives: Methanobrevibacter acididurans
Comparison to close relatives: Methanobacterium alcaliphilum
Comparison to close relatives: Methanobacterium movens
Comparison to close relatives: Methanobacterium subterraneum
Comparison to close relatives: Thermococcus aegaeus
Comparison to close relatives: Methanobacterium oryzae
Comparison to close relatives: Methanobacterium paludis
Comparison to close relatives: Methanobrevibacter wolinii
Comparison to close relatives: Methanobrevibacter ruminantium
Comparison to close relatives: Thermococcus litoralis
Comparison to close relatives: Thermococcus paralvinellae
Comparison to close relatives: Thermococcus gammatolerans
Comparison to close relatives: Thermococcus kodakarensis
Comparison to close relatives: Methanobrevibacter smithii
Comparison to close relatives: Methanobacterium flexile
Comparison to close relatives: Thermococcus piezophilus
Comparison to close relatives: Thermococcus cleftensis
Comparison to close relatives: Thermococcus zilligii
Comparison to close relatives: Methanothermus sociabilis
Comparison to close relatives: Thermococcus thermotolerans
Comparison to close relatives: Thermococcus coalescens
Comparison to close relatives: Methanothermus fervidus
Comparison to close relatives: Methanobacterium petrolearium
Comparison to close relatives: Methanobacterium beijingense
Comparison to close relatives: Thermococcus profundus
Comparison to close relatives: Palaeococcus helgesonii
Comparison to close relatives: Methanothermobacter tenebrarum
Comparison to close relatives: Methanothermobacter marburgensis
Comparison to close relatives: Thermococcus waiotapuensis
Comparison to close relatives: Thermococcus eurythermalis
Comparison to close relatives: Methanobacterium ferruginis
Comparison to close relatives: Thermococcus henrietii
Comparison to close relatives: Palaeococcus pacificus
Comparison to close relatives: Methanothermobacter crinale
Comparison to close relatives: Methanobacterium arcticum
Comparison to close relatives: Thermococcus celericrescens
Comparison to close relatives: Methanothermobacter wolfei
Comparison to close relatives: Methanobacterium congolense
Comparison to close relatives: Methanobacterium movilense
Comparison to close relatives: Thermococcus camini
Comparison to close relatives: Methanothermobacter thermautotrophicus
Comparison to close relatives: Methanobacterium kanagiense
Comparison to close relatives: Methanobacterium aggregans
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Methanotorris formicicus
Comparison to close relatives: Methanothermobacter defluvii
Comparison to close relatives: Methanothermobacter wolfeii
CAZyme: GH101
CAZyme: GH13
CAZyme: GT2
CAZyme: GT13
CAZyme: GT7
CAZyme: GT20
CAZyme: GT22
CAZyme: GT4
CAZyme: GT66
CAZyme: GT1
CAZyme: GT0
CAZyme: CBM50
CAZyme: CBM5
CAZyme: CBM6
CAZyme: CBM48
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Proline biosynthesis, glutamate => proline
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP

GCA_003558335.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_003558335.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_003558335.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_003558335.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_003558335.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_003558335.1 (Pathway)
Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Metabolic module: M01014

GCA_003558335.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_003558335.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_003558335.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_003558335.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_003558335.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_003558335.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCA_003558335.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.5
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.17

GCA_003558335.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.01

GCA_003558335.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.06

GCA_003558335.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.18

GCA_003558335.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 4.3
Relative abundance (%): 0.76

GCA_003558335.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 2.7
Relative abundance (%): 0.71

GCA_003558335.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.11

GCA_003558335.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003558335.1 (MAGs)
MAGs: no MAG matches found