GCA_003162175.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanoculleus taiwanensis
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanofollis ethanolicus
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Methanofollis liminatans
Comparison to close relatives: Methanoculleus receptaculi
Comparison to close relatives: Methanogenium frigidum
Comparison to close relatives: Methanovulcanius yangii
Comparison to close relatives: Methanoculleus chikugoensis
Comparison to close relatives: Methanolacinia petrolearia
Comparison to close relatives: Methanogenium cariaci
Comparison to close relatives: Methanoculleus thermophilus
Comparison to close relatives: Methanogenium marinum
Comparison to close relatives: Methanomethylovorans hollandica
Comparison to close relatives: Methanoculleus palmolei
Comparison to close relatives: Methanofollis fontis
Comparison to close relatives: Methanoculleus sediminis
Comparison to close relatives: Methanocella arvoryzae
Comparison to close relatives: Methanothrix harundinacea
Comparison to close relatives: Methanolinea mesophila
Comparison to close relatives: Methanoculleus horonobensis
Comparison to close relatives: Methanoculleus hydrogenitrophicus
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanoculleus submarinus
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanocella paludicola
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanoplanus endosymbiosus
Comparison to close relatives: Methanoplanus limicola
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanosalsum natronophilum
Comparison to close relatives: Methanocalculus alkaliphilus
Comparison to close relatives: Methanocalculus halotolerans
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Methanospirillum hungatei
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanofollis tationis
CAZyme: GH130
CAZyme: GH0
CAZyme: GH6
CAZyme: GH19
CAZyme: GH105
CAZyme: GH1
CAZyme: GH47
CAZyme: GT81
CAZyme: GT66
CAZyme: GT1
CAZyme: GT2
CAZyme: GT4
CAZyme: GT0
CAZyme: CE4
CAZyme: CE14
CAZyme: CBM50
CAZyme: CBM5
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Pathway: Cysteine biosynthesis, serine => cysteine
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP

GCA_003162175.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_003162175.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_003162175.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_003162175.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_003162175.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_003162175.1 (Pathway)
Pathway: F420 biosynthesis, archaea
Metabolic module: M00378

GCA_003162175.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_003162175.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_003162175.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_003162175.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_003162175.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_003162175.1 (Pathway)
Pathway: Fructose degradation
Metabolic module: MF0015

GCA_003162175.1 (Pathway)
Pathway: Glutamate degradation II
Metabolic module: MF0031

GCA_003162175.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_003162175.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_003162175.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_003162175.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_003162175.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_003162175.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_003162175.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCA_003162175.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 2.8
Relative abundance (%): 0.02

GCA_003162175.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.03

GCA_003162175.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.32

GCA_003162175.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_003162175.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 3.1
Relative abundance (%): 0.01

GCA_003162175.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003162175.1 (MAGs)
MAGs: GCA_003155875.1_20120700_E1M_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003168395.1_20110700_E3M_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003168535.1_20110700_E1D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003171015.1_20110800_E1M_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003158935.1_20120600_E1D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003133305.1_20120500_P28_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003155735.1_20120700_E2X_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003154225.1_20120700_E3M_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003162175.1_20100900_E2D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003162175.1 (MAGs)
MAGs: GCA_003171385.1_20110800_E1S_genomic.fna
Ecosystem: Permafrost-associated_soil