GCA_003139855.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Archaea
Comparison to close relatives: Methanococcoides methylutens
Comparison to close relatives: Methanolobus zinderi
Comparison to close relatives: Methanosarcina horonobensis
Comparison to close relatives: Methanosalsum natronophilum
Comparison to close relatives: Methanosalsum zhilinae
Comparison to close relatives: Methanococcoides burtonii
Comparison to close relatives: Methanosarcina subterranea
Comparison to close relatives: Methanosarcina siciliae
Comparison to close relatives: Methanolobus mangrovi
Comparison to close relatives: Methanospirillum hungatei
Comparison to close relatives: Methanohalophilus mahii
Comparison to close relatives: Methanosarcina vacuolata
Comparison to close relatives: Methanolacinia petrolearia
Comparison to close relatives: Methanolobus sediminis
Comparison to close relatives: Methanohalobium evestigatum
Comparison to close relatives: Methanoregula boonei
Comparison to close relatives: Methanoplanus endosymbiosus
Comparison to close relatives: Methanothrix thermoacetophila
Comparison to close relatives: Methanogenium cariaci
Comparison to close relatives: Methanovulcanius yangii
Comparison to close relatives: Methanoplanus limicola
Comparison to close relatives: Methanoculleus palmolei
Comparison to close relatives: Methanocella arvoryzae
Comparison to close relatives: Methanoculleus marisnigri
Comparison to close relatives: Methanoculleus taiwanensis
Comparison to close relatives: Methanoculleus chikugoensis
Comparison to close relatives: Methanogenium frigidum
Comparison to close relatives: Methanogenium marinum
Comparison to close relatives: Methanomethylovorans thermophila
Comparison to close relatives: Methanoculleus sediminis
Comparison to close relatives: Methanoculleus horonobensis
Comparison to close relatives: Methanolinea mesophila
Comparison to close relatives: Methanoculleus hydrogenitrophicus
Comparison to close relatives: Methanocalculus halotolerans
Comparison to close relatives: Methanofollis liminatans
Comparison to close relatives: Methanoculleus thermophilus
Comparison to close relatives: Methanococcoides orientis
Comparison to close relatives: Methanosphaerula palustris
Comparison to close relatives: Methanofollis ethanolicus
Comparison to close relatives: Methanoculleus receptaculi
Comparison to close relatives: Methanolinea tarda
Comparison to close relatives: Methanofollis fontis
Comparison to close relatives: Methanocalculus alkaliphilus
Comparison to close relatives: Methanofollis tationis
Comparison to close relatives: Methanothrix soehngenii
Comparison to close relatives: Methanocella paludicola
Comparison to close relatives: Methanolobus bombayensis
Comparison to close relatives: Methanohalophilus halophilus
Comparison to close relatives: Methanosarcina semesiae
Comparison to close relatives: Methanomethylovorans hollandica
CAZyme: GH130
CAZyme: GH0
CAZyme: GH6
CAZyme: GH105
CAZyme: GH1
CAZyme: GT81
CAZyme: GT66
CAZyme: GT4
CAZyme: GT2
CAZyme: GT1
CAZyme: GT0
CAZyme: CE14
CAZyme: CBM50
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Pathway: F420 biosynthesis, archaea

GCA_003139855.1 (Pathway)
Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Metabolic module: M00569

GCA_003139855.1 (Pathway)
Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
Metabolic module: M00580

GCA_003139855.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_003139855.1 (Pathway)
Pathway: Heme biosynthesis, archaea, siroheme => heme
Metabolic module: M00847

GCA_003139855.1 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_003139855.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_003139855.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_003139855.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_003139855.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_003139855.1 (Pathway)
Pathway: Glutamate degradation II
Metabolic module: MF0031

GCA_003139855.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_003139855.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_003139855.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_003139855.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_003139855.1 (Pathway)
Pathway: Methanogenesis - methyl-coM
Metabolic module: MF0099

GCA_003139855.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 2.4
Relative abundance (%): 0.02

GCA_003139855.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.03

GCA_003139855.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.39

GCA_003139855.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_003139855.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 3.3
Relative abundance (%): 0.01

GCA_003139855.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_003139855.1 (MAGs)
MAGs: GCA_002509385.1_ASM250938v1_genomic.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: GCA_003138595.1_20110800_S3D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003159635.1_20120700_S3D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003159695.1_20120700_S2X_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003163595.1_20120800_S2X_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003139855.1_20110800_S2M_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003163455.1_20120800_S1X_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003159405.1_20120700_S3X_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003139895.1_20110800_S2D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003165375.1_20120700_S1D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003139235.1_20110800_S1D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003166275.1_20110700_S2M_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003141075.1_20120800_S1D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: GCA_003156255.1_20120600_S2D_genomic.fna
Ecosystem: Permafrost-associated_soil

GCA_003139855.1 (MAGs)
MAGs: 3300009764_11.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300014156_12.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300014158_13.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300014162_12.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300017946_10.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300018008_11.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300018033_10.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300018035_13.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300018037_8.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300018044_9.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300018046_11.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300018047_7.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300023088_11.fna
Ecosystem: Generic

GCA_003139855.1 (MAGs)
MAGs: 3300025432_14.fna
Ecosystem: Generic