GCA_001464665.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Stenotrophobacter roseus
Comparison to close relatives: Stenotrophobacter namibiensis
Comparison to close relatives: Stenotrophobacter terrae
Comparison to close relatives: Tellurimicrobium multivorans
Comparison to close relatives: Blastocatella fastidiosa
Comparison to close relatives: Aridibacter nitratireducens
Comparison to close relatives: Aridibacter famidurans
Comparison to close relatives: Aridibacter kavangonensis
Comparison to close relatives: Chloracidobacterium thermophilum
Comparison to close relatives: Granulicella tundricola
Comparison to close relatives: Occallatibacter savannae
Comparison to close relatives: Terriglobus saanensis
Comparison to close relatives: Acidicapsa ligni
Comparison to close relatives: Granulicella sibirica
Comparison to close relatives: Terriglobus aquaticus
Comparison to close relatives: Granulicella aggregans
Comparison to close relatives: Terriglobus albidus
Comparison to close relatives: Acidicapsa acidisoli
Comparison to close relatives: Granulicella mallensis
Comparison to close relatives: Terriglobus tenax
Comparison to close relatives: Edaphobacter lichenicola
Comparison to close relatives: Alloacidobacterium dinghuense
Comparison to close relatives: Acidicapsa dinghuensis
Comparison to close relatives: Granulicella sapmiensis
Comparison to close relatives: Occallatibacter riparius
Comparison to close relatives: Edaphobacter flagellatus
Comparison to close relatives: Acidipila rosea
Comparison to close relatives: Paracidobacterium acidisoli
Comparison to close relatives: Silvibacterium dinghuense
Comparison to close relatives: Terracidiphilus gabretensis
Comparison to close relatives: Acidisarcina polymorpha
Comparison to close relatives: Acidicapsa borealis
Comparison to close relatives: Edaphobacter modestus
Comparison to close relatives: Edaphobacter dinghuensis
Comparison to close relatives: Granulicella pectinivorans
Comparison to close relatives: Silvibacterium bohemicum
Comparison to close relatives: Terriglobus roseus
Comparison to close relatives: Granulicella arctica
Comparison to close relatives: Edaphobacter aggregans
Comparison to close relatives: Edaphobacter bradus
Comparison to close relatives: Acidobacterium capsulatum
Comparison to close relatives: Granulicella rosea
Comparison to close relatives: Vicinamibacter silvestris
Comparison to close relatives: Edaphobacter acidisoli
Comparison to close relatives: Devosia epidermidihirudinis
Comparison to close relatives: Devosia faecipullorum
Comparison to close relatives: Butyrivibrio crossotus
Comparison to close relatives: Kordiimonas lipolytica
Comparison to close relatives: Geotalea uraniireducens
Comparison to close relatives: Bdellovibrio reynosensis
Comparison to close relatives: Eshraghiella crossota
Carbon source: starch
CAZyme: GH13
CAZyme: GH92
CAZyme: GH6
CAZyme: GH15
CAZyme: GH23
CAZyme: GH20
CAZyme: GH5
CAZyme: GH3
CAZyme: GH73
CAZyme: GH65
CAZyme: GH28
CAZyme: GH133
CAZyme: GH57
CAZyme: GH101
CAZyme: GH77
CAZyme: GH19
CAZyme: GH16
CAZyme: GH0
CAZyme: GH46
CAZyme: GH1
CAZyme: GT2
CAZyme: GT51
CAZyme: GT13
CAZyme: GT35

GCA_001464665.1 (CAZyme)
CAZyme: GT4
Occurance: 27

GCA_001464665.1 (CAZyme)
CAZyme: GT1
Occurance: 6

GCA_001464665.1 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: GT7
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: GT26
Occurance: 2

GCA_001464665.1 (CAZyme)
CAZyme: GT30
Occurance: 3

GCA_001464665.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: GT28
Occurance: 6

GCA_001464665.1 (CAZyme)
CAZyme: GT21
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: GT0
Occurance: 4

GCA_001464665.1 (CAZyme)
CAZyme: GT9
Occurance: 4

GCA_001464665.1 (CAZyme)
CAZyme: GT96
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: PL12
Occurance: 3

GCA_001464665.1 (CAZyme)
CAZyme: CE4
Occurance: 5

GCA_001464665.1 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: CE0
Occurance: 4

GCA_001464665.1 (CAZyme)
CAZyme: CE11
Occurance: 4

GCA_001464665.1 (CAZyme)
CAZyme: CE9
Occurance: 3

GCA_001464665.1 (CAZyme)
CAZyme: CE1
Occurance: 3

GCA_001464665.1 (CAZyme)
CAZyme: CBM2
Occurance: 7

GCA_001464665.1 (CAZyme)
CAZyme: CBM41
Occurance: 2

GCA_001464665.1 (CAZyme)
CAZyme: CBM5
Occurance: 7

GCA_001464665.1 (CAZyme)
CAZyme: CBM6
Occurance: 2

GCA_001464665.1 (CAZyme)
CAZyme: CBM50
Occurance: 10

GCA_001464665.1 (CAZyme)
CAZyme: CBM9
Occurance: 2

GCA_001464665.1 (CAZyme)
CAZyme: CBM32
Occurance: 2

GCA_001464665.1 (CAZyme)
CAZyme: CBM23
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: CBM13
Occurance: 7

GCA_001464665.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001464665.1 (CAZyme)
CAZyme: CBM48
Occurance: 3

GCA_001464665.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_001464665.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_001464665.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001464665.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001464665.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001464665.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001464665.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001464665.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001464665.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001464665.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_001464665.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001464665.1 (Pathway)
Pathway: Methionine degradation
Metabolic module: M00035

GCA_001464665.1 (Pathway)
Pathway: Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate
Metabolic module: M00038

GCA_001464665.1 (Pathway)
Pathway: Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Metabolic module: M00046

GCA_001464665.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001464665.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001464665.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001464665.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001464665.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_001464665.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_001464665.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001464665.1 (Pathway)
Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC
Metabolic module: M00091

GCA_001464665.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001464665.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_001464665.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001464665.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_001464665.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001464665.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001464665.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_001464665.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001464665.1 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_001464665.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_001464665.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001464665.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_001464665.1 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_001464665.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001464665.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001464665.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001464665.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_001464665.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001464665.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001464665.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001464665.1 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_001464665.1 (Pathway)
Pathway: Adenine ribonucleotide degradation, AMP => Urate
Metabolic module: M00958

GCA_001464665.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_001464665.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001464665.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001464665.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_001464665.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_001464665.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_001464665.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_001464665.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001464665.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001464665.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001464665.1 (Pathway)
Pathway: beta-Oxidation
Metabolic module: M00087

GCA_001464665.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001464665.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001464665.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_001464665.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_001464665.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_001464665.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001464665.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001464665.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001464665.1 (Pathway)
Pathway: Arginine degradation IV
Metabolic module: MF0054

GCA_001464665.1 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_001464665.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_001464665.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001464665.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001464665.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001464665.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_001464665.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_001464665.1 (Pathway)
Pathway: Nitrate reduction (dissimilatory)
Metabolic module: MF0101

GCA_001464665.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.05

GCA_001464665.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.04

GCA_001464665.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.15

GCA_001464665.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_001464665.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 1.8
Relative abundance (%): 0.06

GCA_001464665.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 6.4
Relative abundance (%): 0.18

GCA_001464665.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 6.9
Relative abundance (%): 0.03

GCA_001464665.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 3.2
Relative abundance (%): 0.01

GCA_001464665.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 10.7
Relative abundance (%): 0.04

GCA_001464665.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_001464665.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_001464665.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464665.1 (MAGs)
MAGs: no MAG matches found