GCA_001464425.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Woodsholea maritima
Comparison to close relatives: Brevundimonas pondensis
Comparison to close relatives: Brevundimonas diminuta
Comparison to close relatives: Albimonas pacifica
Comparison to close relatives: Rhodobacter flagellatus
Comparison to close relatives: Asprobacter aquaticus
Comparison to close relatives: Ponticaulis koreensis
Comparison to close relatives: Rhodobacter tardus
Comparison to close relatives: Defluviimonas sediminis
Comparison to close relatives: Vitreimonas flagellata
Comparison to close relatives: Brevundimonas terrae
Comparison to close relatives: Oceanicaulis alexandrii
Comparison to close relatives: Brevundimonas abyssalis
Comparison to close relatives: Ancylobacter novellus
Comparison to close relatives: Brevundimonas canariensis
Comparison to close relatives: Pyruvatibacter mobilis
Comparison to close relatives: Brevundimonas naejangsanensis
Comparison to close relatives: Brevundimonas vancanneytii
Comparison to close relatives: Asticcacaulis benevestitus
Comparison to close relatives: Amaricoccus kaplicensis
Comparison to close relatives: Maricaulis salignorans
Comparison to close relatives: Maricaulis washingtonensis
Comparison to close relatives: Hyphobacterium vulgare
Comparison to close relatives: Amaricoccus tamworthensis
Comparison to close relatives: Marinicauda salina
Comparison to close relatives: Terricaulis silvestris
Comparison to close relatives: Oceanicaulis stylophorae
Comparison to close relatives: Marinicauda algicola
Comparison to close relatives: Shinella curvata
Comparison to close relatives: Asticcacaulis biprosthecium
Comparison to close relatives: Marinicauda pacifica
Comparison to close relatives: Glycocaulis albus
Comparison to close relatives: Aquidulcibacter paucihalophilus
Comparison to close relatives: Glycocaulis abyssi
Comparison to close relatives: Ancylobacter gelatini
Comparison to close relatives: Photocaulis sulfatitolerans
Comparison to close relatives: Aquibium carbonis
Comparison to close relatives: Hyphomonas rosenbergii
Comparison to close relatives: Glycocaulis profundi
Comparison to close relatives: Hyphomonas chukchiensis
Comparison to close relatives: Hyphomonas oceanitis
Comparison to close relatives: Hyphomonas hirschiana
Comparison to close relatives: Hyphomonas neptunium
Comparison to close relatives: Glycocaulis alkaliphilus
Comparison to close relatives: Ancylobacter rudongensis
Comparison to close relatives: Hyphomonas polymorpha
Comparison to close relatives: Hyphobacterium indicum
Comparison to close relatives: Pseudaquidulcibacter saccharophilus
Comparison to close relatives: Photocaulis rubescens
Comparison to close relatives: Alkalicaulis satelles
Comparison to close relatives: Stagnihabitans tardus
Carbon source: cellulose
CAZyme: GH13
CAZyme: GH6
CAZyme: GH0
CAZyme: GH65
CAZyme: GH23
CAZyme: GH28
CAZyme: GH15
CAZyme: GH20
CAZyme: GH16
CAZyme: GH101
CAZyme: GH103
CAZyme: GH46
CAZyme: GH19
CAZyme: GH24
CAZyme: GH43
CAZyme: GH135
CAZyme: GH1
CAZyme: GH5
CAZyme: GH109
CAZyme: GH3
CAZyme: GH152
CAZyme: GH102
CAZyme: GH25
CAZyme: GT0

GCA_001464425.1 (CAZyme)
CAZyme: GT4
Occurance: 17

GCA_001464425.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: GT51
Occurance: 6

GCA_001464425.1 (CAZyme)
CAZyme: GT2
Occurance: 31

GCA_001464425.1 (CAZyme)
CAZyme: GT41
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: GT25
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: GT83
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: GT26
Occurance: 6

GCA_001464425.1 (CAZyme)
CAZyme: GT1
Occurance: 8

GCA_001464425.1 (CAZyme)
CAZyme: GT20
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: GT28
Occurance: 3

GCA_001464425.1 (CAZyme)
CAZyme: GT7
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: GT9
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: PL10
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: PL0
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CE1
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CE6
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CE11
Occurance: 3

GCA_001464425.1 (CAZyme)
CAZyme: CE0
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CE15
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CE12
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_001464425.1 (CAZyme)
CAZyme: CBM50
Occurance: 22

GCA_001464425.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: CBM5
Occurance: 3

GCA_001464425.1 (CAZyme)
CAZyme: CBM41
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: CBM51
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_001464425.1 (CAZyme)
CAZyme: CBM6
Occurance: 2

GCA_001464425.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_001464425.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001464425.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001464425.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001464425.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001464425.1 (Pathway)
Pathway: Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Metabolic module: M00008

GCA_001464425.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001464425.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001464425.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001464425.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001464425.1 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_001464425.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_001464425.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_001464425.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001464425.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001464425.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001464425.1 (Pathway)
Pathway: Methionine degradation
Metabolic module: M00035

GCA_001464425.1 (Pathway)
Pathway: Leucine degradation, leucine => acetoacetate + acetyl-CoA
Metabolic module: M00036

GCA_001464425.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_001464425.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001464425.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001464425.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001464425.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001464425.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001464425.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_001464425.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001464425.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_001464425.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001464425.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_001464425.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001464425.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001464425.1 (Pathway)
Pathway: Succinate dehydrogenase, prokaryotes
Metabolic module: M00149

GCA_001464425.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_001464425.1 (Pathway)
Pathway: Cytochrome c oxidase, cbb3-type
Metabolic module: M00156

GCA_001464425.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_001464425.1 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Metabolic module: M00364

GCA_001464425.1 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_001464425.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001464425.1 (Pathway)
Pathway: Anoxygenic photosystem II
Metabolic module: M00597

GCA_001464425.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001464425.1 (Pathway)
Pathway: Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Metabolic module: M00741

GCA_001464425.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_001464425.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_001464425.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001464425.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_001464425.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_001464425.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001464425.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001464425.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001464425.1 (Pathway)
Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Metabolic module: M01014

GCA_001464425.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_001464425.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001464425.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_001464425.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_001464425.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_001464425.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001464425.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001464425.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001464425.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001464425.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001464425.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001464425.1 (Pathway)
Pathway: Isoleucine degradation
Metabolic module: MF0036

GCA_001464425.1 (Pathway)
Pathway: Leucine degradation
Metabolic module: MF0037

GCA_001464425.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_001464425.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_001464425.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_001464425.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001464425.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001464425.1 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_001464425.1 (Pathway)
Pathway: Entner-Doudoroff pathway
Metabolic module: MF0066

GCA_001464425.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_001464425.1 (Pathway)
Pathway: NADH:ferredoxin oxidoreductase
Metabolic module: MF0069

GCA_001464425.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001464425.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_001464425.1 (Pathway)
Pathway: Lactate consumption I
Metabolic module: MF0079

GCA_001464425.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001464425.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_001464425.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.01

GCA_001464425.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001464425.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_001464425.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 17.7
Relative abundance (%): 0.05

GCA_001464425.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_001464425.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 1
Relative abundance (%): 0

GCA_001464425.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.03

GCA_001464425.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 1.1
Relative abundance (%): 0

GCA_001464425.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 8.7
Relative abundance (%): 0.05

GCA_001464425.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 17
Relative abundance (%): 0.03

GCA_001464425.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_001464425.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 48.3
Relative abundance (%): 0.13

GCA_001464425.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 33.2
Relative abundance (%): 0.03

GCA_001464425.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 41
Relative abundance (%): 0.03

GCA_001464425.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 2
Relative abundance (%): 0.02

GCA_001464425.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.17

GCA_001464425.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_001464425.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001464425.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.15

GCA_001464425.1 (MAGs)
MAGs: no MAG matches found