GCA_001464115.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Mesoterricola sediminis
Comparison to close relatives: Seleniibacterium seleniigenes
Comparison to close relatives: Chlamydia gallinacea
Comparison to close relatives: Pelobacter massiliensis
Comparison to close relatives: Geotalea uraniireducens
Comparison to close relatives: Chlamydia trachomatis
Comparison to close relatives: Desulfurivibrio alkaliphilus
Comparison to close relatives: Waddlia chondrophila
Comparison to close relatives: Malonomonas rubra
Comparison to close relatives: Geomonas bemidjiensis
Comparison to close relatives: Chlamydia felis
Comparison to close relatives: Chlamydia pneumoniae
Comparison to close relatives: Syntrophotalea carbinolica
Comparison to close relatives: Desulfosarcina cetonica
Comparison to close relatives: Geothrix rubra
Comparison to close relatives: Desulfatiferula olefinivorans
Comparison to close relatives: Chlamydia psittaci
Comparison to close relatives: Geobacter metallireducens
Comparison to close relatives: Chlamydia avium
Comparison to close relatives: Chlamydia abortus
Comparison to close relatives: Chlamydia poikilotherma
Comparison to close relatives: Pelovirga terrestris
Comparison to close relatives: Chlamydiifrater volucris
Comparison to close relatives: Chlamydia buteonis
Comparison to close relatives: Chlamydia crocodili
Comparison to close relatives: Chlamydiifrater phoenicopteri
Comparison to close relatives: Chlamydia muridarum
Comparison to close relatives: Simkania negevensis
Comparison to close relatives: Vicinamibacter silvestris
Comparison to close relatives: Desulfococcus multivorans
Comparison to close relatives: Parachlamydia acanthamoebae
Comparison to close relatives: Desulfococcus biacutus
Comparison to close relatives: Geothrix alkalitolerans
Comparison to close relatives: Geothrix paludis
Comparison to close relatives: Chlamydia pecorum
Comparison to close relatives: Geothrix terrae
Comparison to close relatives: Geoalkalibacter subterraneus
Comparison to close relatives: Geothrix oryzisoli
Comparison to close relatives: Oleidesulfovibrio alaskensis
Comparison to close relatives: Chlamydia suis
Comparison to close relatives: Desulfobotulus pelophilus
Comparison to close relatives: Desulfuromonas acetoxidans
Comparison to close relatives: Desulfobotulus sapovorans
Comparison to close relatives: Geobacter grbiciae
Comparison to close relatives: Desulfobulbus propionicus
Comparison to close relatives: Geoalkalibacter ferrihydriticus
Comparison to close relatives: Neochlamydia hartmannellae
Comparison to close relatives: Desulfobotulus mexicanus
Comparison to close relatives: Desulfonatronobacter acidivorans
Comparison to close relatives: Desulfosudis oleivorans
Comparison to close relatives: Pelobacter seleniigenes
Comparison to close relatives: Citrifermentans bemidjiense
Carbon source: starch
CAZyme: GH13
CAZyme: GH0
CAZyme: GH6
CAZyme: GH28
CAZyme: GH77
CAZyme: GH32
CAZyme: GH3
CAZyme: GH71
CAZyme: GH73
CAZyme: GH23
CAZyme: GT13
CAZyme: GT35
CAZyme: GT4
CAZyme: GT2
CAZyme: GT32
CAZyme: GT74
CAZyme: GT1
CAZyme: GT5
CAZyme: GT30
CAZyme: GT28
CAZyme: GT9
CAZyme: GT19
CAZyme: GT75

GCA_001464115.1 (CAZyme)
CAZyme: GT0
Occurance: 3

GCA_001464115.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_001464115.1 (CAZyme)
CAZyme: CE4
Occurance: 1

GCA_001464115.1 (CAZyme)
CAZyme: CE11
Occurance: 1

GCA_001464115.1 (CAZyme)
CAZyme: CBM50
Occurance: 9

GCA_001464115.1 (CAZyme)
CAZyme: CBM48
Occurance: 2

GCA_001464115.1 (CAZyme)
CAZyme: CBM13
Occurance: 2

GCA_001464115.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001464115.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001464115.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001464115.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001464115.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001464115.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001464115.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001464115.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001464115.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001464115.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001464115.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001464115.1 (Pathway)
Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC
Metabolic module: M00091

GCA_001464115.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001464115.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001464115.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_001464115.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001464115.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001464115.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001464115.1 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_001464115.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_001464115.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001464115.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_001464115.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_001464115.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_001464115.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001464115.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001464115.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001464115.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001464115.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001464115.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001464115.1 (Pathway)
Pathway: Bifidobacterium shunt
Metabolic module: MF0065

GCA_001464115.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_001464115.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001464115.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001464115.1 (Pathway)
Pathway: Formate conversion
Metabolic module: MF0077

GCA_001464115.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001464115.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.5
Relative abundance (%): 0.01

GCA_001464115.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.8
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 2.9
Relative abundance (%): 0.01

GCA_001464115.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.7
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 10.6
Relative abundance (%): 0.01

GCA_001464115.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001464115.1 (MAGs)
MAGs: no MAG matches found