GCA_001458075.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Aliidiomarina sanyensis
Comparison to close relatives: Aliidiomarina indica
Comparison to close relatives: Aliidiomarina halalkaliphila
Comparison to close relatives: Aliidiomarina quisquiliarum
Comparison to close relatives: Aliidiomarina haloalkalitolerans
Comparison to close relatives: Aliidiomarina iranensis
Comparison to close relatives: Aliidiomarina taiwanensis
Comparison to close relatives: Aliidiomarina shirensis
Comparison to close relatives: Aliidiomarina celeris
Comparison to close relatives: Aliidiomarina maris
Comparison to close relatives: Pseudidiomarina atlantica
Comparison to close relatives: Pseudidiomarina salinarum
Comparison to close relatives: Pseudidiomarina aestuarii
Comparison to close relatives: Aliidiomarina soli
Comparison to close relatives: Pseudidiomarina sediminum
Comparison to close relatives: Pseudidiomarina donghaiensis
Comparison to close relatives: Pseudidiomarina woesei
Comparison to close relatives: Pseudidiomarina halophila
Comparison to close relatives: Pseudidiomarina homiensis
Comparison to close relatives: Aliidiomarina sedimenti
Comparison to close relatives: Aliidiomarina minuta
Comparison to close relatives: Pseudidiomarina mangrovi
Comparison to close relatives: Pseudidiomarina planktonica
Comparison to close relatives: Pseudidiomarina taiwanensis
Comparison to close relatives: Pseudidiomarina marina
Comparison to close relatives: Pseudidiomarina gelatinasegens
Comparison to close relatives: Idiomarina tyrosinivorans
Comparison to close relatives: Idiomarina xiamenensis
Comparison to close relatives: Pseudidiomarina tainanensis
Comparison to close relatives: Pseudidiomarina insulisalsae
Comparison to close relatives: Pseudidiomarina andamanensis
Comparison to close relatives: Idiomarina seosinensis
Comparison to close relatives: Idiomarina abyssalis
Comparison to close relatives: Idiomarina rhizosphaerae
Comparison to close relatives: Idiomarina indica
Comparison to close relatives: Idiomarina piscisalsi
Comparison to close relatives: Idiomarina ramblicola
Comparison to close relatives: Pseudidiomarina aquimaris
Comparison to close relatives: Idiomarina loihiensis
Comparison to close relatives: Idiomarina aquatica
Comparison to close relatives: Idiomarina zobellii
Comparison to close relatives: Idiomarina baltica
Comparison to close relatives: Idiomarina fontislapidosi
Comparison to close relatives: Photobacterium carnosum
Comparison to close relatives: Thalassomonas viridans
Comparison to close relatives: Celerinatantimonas diazotrophica
Comparison to close relatives: Photobacterium frigidiphilum
Comparison to close relatives: Oceanisphaera arctica
Comparison to close relatives: Paraphotobacterium marinum
Comparison to close relatives: Oceanisphaera profunda
CAZyme: GH23
CAZyme: GH13
CAZyme: GH16
CAZyme: GH6
CAZyme: GH3
CAZyme: GH65
CAZyme: GH28
CAZyme: GH73
CAZyme: GH1
CAZyme: GH43
CAZyme: GH135
CAZyme: GH0
CAZyme: GH19
CAZyme: GH103
CAZyme: GH114
CAZyme: GT13
CAZyme: GT2
CAZyme: GT4
CAZyme: GT51
CAZyme: GT107
CAZyme: GT22
CAZyme: GT1
CAZyme: GT28
CAZyme: GT0
CAZyme: GT30
CAZyme: GT19

GCA_001458075.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_001458075.1 (CAZyme)
CAZyme: PL12
Occurance: 1

GCA_001458075.1 (CAZyme)
CAZyme: CE11
Occurance: 3

GCA_001458075.1 (CAZyme)
CAZyme: CE9
Occurance: 2

GCA_001458075.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_001458075.1 (CAZyme)
CAZyme: CBM41
Occurance: 5

GCA_001458075.1 (CAZyme)
CAZyme: CBM20
Occurance: 2

GCA_001458075.1 (CAZyme)
CAZyme: CBM50
Occurance: 12

GCA_001458075.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_001458075.1 (CAZyme)
CAZyme: CBM5
Occurance: 4

GCA_001458075.1 (CAZyme)
CAZyme: CBM6
Occurance: 2

GCA_001458075.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_001458075.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_001458075.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001458075.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001458075.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001458075.1 (Pathway)
Pathway: Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Metabolic module: M00008

GCA_001458075.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001458075.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001458075.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001458075.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001458075.1 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_001458075.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_001458075.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001458075.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001458075.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001458075.1 (Pathway)
Pathway: Methionine degradation
Metabolic module: M00035

GCA_001458075.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_001458075.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001458075.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001458075.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001458075.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001458075.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_001458075.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_001458075.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001458075.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001458075.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001458075.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_001458075.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001458075.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_001458075.1 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCA_001458075.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P
Metabolic module: M00124

GCA_001458075.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001458075.1 (Pathway)
Pathway: Succinate dehydrogenase, prokaryotes
Metabolic module: M00149

GCA_001458075.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_001458075.1 (Pathway)
Pathway: Cytochrome c oxidase, cbb3-type
Metabolic module: M00156

GCA_001458075.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_001458075.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_001458075.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001458075.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001458075.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_001458075.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001458075.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_001458075.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_001458075.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001458075.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc
Metabolic module: M00996

GCA_001458075.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001458075.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_001458075.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_001458075.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001458075.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_001458075.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_001458075.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001458075.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001458075.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001458075.1 (Pathway)
Pathway: beta-Oxidation
Metabolic module: M00087

GCA_001458075.1 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_001458075.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001458075.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001458075.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001458075.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001458075.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_001458075.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_001458075.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_001458075.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_001458075.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001458075.1 (Pathway)
Pathway: Glutamine degradation I
Metabolic module: MF0046

GCA_001458075.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001458075.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001458075.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001458075.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001458075.1 (Pathway)
Pathway: Entner-Doudoroff pathway
Metabolic module: MF0066

GCA_001458075.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_001458075.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_001458075.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_001458075.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.04

GCA_001458075.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.1

GCA_001458075.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.05

GCA_001458075.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.03

GCA_001458075.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001458075.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001458075.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 1.9
Relative abundance (%): 0.72

GCA_001458075.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_001458075.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001458075.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.08

GCA_001458075.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001458075.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001458075.1 (MAGs)
MAGs: 3300025347_15.fna
Ecosystem: Generic