GCA_001447805.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Alcanivorax sediminis
Comparison to close relatives: Thiohalobacter thiocyanaticus
Comparison to close relatives: Thioprofundum hispidum
Comparison to close relatives: Endothiovibrio diazotrophicus
Comparison to close relatives: Thioalkalivibrio denitrificans
Comparison to close relatives: Ectothiorhodospira lacustris
Comparison to close relatives: Alcanivorax hongdengensis
Comparison to close relatives: Alcanivorax profundi
Comparison to close relatives: Alcanivorax nanhaiticus
Comparison to close relatives: Alcanivorax xiamenensis
Comparison to close relatives: Alcanivorax dieselolei
Comparison to close relatives: Halochromatium roseum
Comparison to close relatives: Sulfuriflexus mobilis
Comparison to close relatives: Thiogranum longum
Comparison to close relatives: Thiorhodospira sibirica
Comparison to close relatives: Alcanivorax borkumensis
Comparison to close relatives: Halochromatium glycolicum
Comparison to close relatives: Sedimenticola selenatireducens
Comparison to close relatives: Alcanivorax jadensis
Comparison to close relatives: Ectothiorhodospira magna
Comparison to close relatives: Sedimenticola hydrogenitrophicus
Comparison to close relatives: Acidihalobacter yilgarnensis
Comparison to close relatives: Acidihalobacter aeolianus
Comparison to close relatives: Spongiibacter marinus
Comparison to close relatives: Pseudohongiella nitratireducens
Comparison to close relatives: Methylococcus mesophilus
Comparison to close relatives: Thioprofundum lithotrophicum
Comparison to close relatives: Methylobacter luteus
Comparison to close relatives: Marichromatium purpuratum
Comparison to close relatives: Methylobacter marinus
Comparison to close relatives: Alkalimarinus coralli
Comparison to close relatives: Thioalkalivibrio nitratireducens
Comparison to close relatives: Acidihalobacter ferrooxydans
Comparison to close relatives: Zhongshania aquimaris
Comparison to close relatives: Spongiibacter tropicus
Comparison to close relatives: Marinobacterium stanieri
Comparison to close relatives: Zhongshania aliphaticivorans
Comparison to close relatives: Marinobacter lutaoensis
Comparison to close relatives: Marinobacter salarius
Comparison to close relatives: Lamprocystis purpurea
Comparison to close relatives: Leucothrix mucor
Comparison to close relatives: Nitrosococcus oceani
Comparison to close relatives: Thiorhodovibrio litoralis
Comparison to close relatives: Marinobacter santoriniensis
Comparison to close relatives: Spiribacter salinus
Comparison to close relatives: Marinobacter similis
Comparison to close relatives: Amphritea pacifica
Comparison to close relatives: Marinobacter denitrificans
Comparison to close relatives: Marinobacter salinus
Comparison to close relatives: Marinobacter mangrovi
Comparison to close relatives: Alloalcanivorax dieselolei
Carbon source: starch
CAZyme: GH94
CAZyme: GH13
CAZyme: GH0
CAZyme: GH6
CAZyme: GH31
CAZyme: GH65
CAZyme: GH23
CAZyme: GH28
CAZyme: GH15
CAZyme: GH57
CAZyme: GH77
CAZyme: GH3
CAZyme: GH16
CAZyme: GH103
CAZyme: GH19
CAZyme: GH73
CAZyme: GH43
CAZyme: GH114
CAZyme: GT84
CAZyme: GT13
CAZyme: GT35
CAZyme: GT51
CAZyme: GT4
CAZyme: GT2

GCA_001447805.1 (CAZyme)
CAZyme: GT0
Occurance: 6

GCA_001447805.1 (CAZyme)
CAZyme: GT47
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: GT5
Occurance: 4

GCA_001447805.1 (CAZyme)
CAZyme: GT9
Occurance: 6

GCA_001447805.1 (CAZyme)
CAZyme: GT28
Occurance: 5

GCA_001447805.1 (CAZyme)
CAZyme: GT32
Occurance: 2

GCA_001447805.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: GT1
Occurance: 2

GCA_001447805.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: GT82
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: CE11
Occurance: 4

GCA_001447805.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_001447805.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: CE7
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: CBM26
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: CBM41
Occurance: 10

GCA_001447805.1 (CAZyme)
CAZyme: CBM50
Occurance: 24

GCA_001447805.1 (CAZyme)
CAZyme: CBM48
Occurance: 7

GCA_001447805.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_001447805.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: CBM6
Occurance: 2

GCA_001447805.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001447805.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_001447805.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_001447805.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_001447805.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001447805.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001447805.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001447805.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001447805.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001447805.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001447805.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001447805.1 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_001447805.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_001447805.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_001447805.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001447805.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001447805.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001447805.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_001447805.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001447805.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001447805.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001447805.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_001447805.1 (Pathway)
Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Metabolic module: M00064

GCA_001447805.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_001447805.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001447805.1 (Pathway)
Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC
Metabolic module: M00091

GCA_001447805.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001447805.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001447805.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001447805.1 (Pathway)
Pathway: Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Metabolic module: M00117

GCA_001447805.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_001447805.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001447805.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_001447805.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_001447805.1 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCA_001447805.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001447805.1 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_001447805.1 (Pathway)
Pathway: NADH:quinone oxidoreductase, prokaryotes
Metabolic module: M00144

GCA_001447805.1 (Pathway)
Pathway: Succinate dehydrogenase, prokaryotes
Metabolic module: M00149

GCA_001447805.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_001447805.1 (Pathway)
Pathway: Cytochrome c oxidase, cbb3-type
Metabolic module: M00156

GCA_001447805.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_001447805.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_001447805.1 (Pathway)
Pathway: Assimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00531

GCA_001447805.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001447805.1 (Pathway)
Pathway: Trehalose biosynthesis, D-glucose 1P => trehalose
Metabolic module: M00565

GCA_001447805.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_001447805.1 (Pathway)
Pathway: Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Metabolic module: M00572

GCA_001447805.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001447805.1 (Pathway)
Pathway: Imipenem resistance, repression of porin OprD
Metabolic module: M00745

GCA_001447805.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_001447805.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_001447805.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001447805.1 (Pathway)
Pathway: UDP-L-FucNAc biosynthesis, UDP-GlcNAc => UDP-L-FucNAc
Metabolic module: M00923

GCA_001447805.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_001447805.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_001447805.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001447805.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc
Metabolic module: M00996

GCA_001447805.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001447805.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001447805.1 (Pathway)
Pathway: UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Metabolic module: M01009

GCA_001447805.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_001447805.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001447805.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_001447805.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001447805.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_001447805.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_001447805.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_001447805.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_001447805.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001447805.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001447805.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001447805.1 (Pathway)
Pathway: Siroheme biosynthesis, glutamyl-tRNA => siroheme
Metabolic module: M00846

GCA_001447805.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001447805.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001447805.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001447805.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001447805.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_001447805.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_001447805.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001447805.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001447805.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001447805.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001447805.1 (Pathway)
Pathway: Arginine degradation IV
Metabolic module: MF0054

GCA_001447805.1 (Pathway)
Pathway: Bifidobacterium shunt
Metabolic module: MF0065

GCA_001447805.1 (Pathway)
Pathway: Glycolysis (preparatory phase)
Metabolic module: MF0067

GCA_001447805.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001447805.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001447805.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_001447805.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001447805.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_001447805.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001447805.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_001447805.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_001447805.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.5

GCA_001447805.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001447805.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.03

GCA_001447805.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.06

GCA_001447805.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 4.8
Relative abundance (%): 0.05

GCA_001447805.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001447805.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001447805.1 (MAGs)
MAGs: GCA_002388825.1_ASM238882v1_genomic.fna
Ecosystem: Generic