GCA_001443455.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Desulfuromonas acetoxidans
Comparison to close relatives: Thermosulfuriphilus ammonigenes
Comparison to close relatives: Stigmatella aurantiaca
Comparison to close relatives: Syntrophotalea carbinolica
Comparison to close relatives: Desulfuromonas carbonis
Comparison to close relatives: Dissulfuribacter thermophilus
Comparison to close relatives: Geotalea daltonii
Comparison to close relatives: Anaeromyxobacter diazotrophicus
Comparison to close relatives: Citreicoccus inhibens
Comparison to close relatives: Myxococcus eversor
Comparison to close relatives: Syntrophobacter fumaroxidans
Comparison to close relatives: Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis
Comparison to close relatives: Thermodesulforhabdus norvegica
Comparison to close relatives: Deferrisoma camini
Comparison to close relatives: Anaeromyxobacter dehalogenans
Comparison to close relatives: Dissulfurirhabdus thermomarina
Comparison to close relatives: Desulfacinum infernum
Comparison to close relatives: Desulfolithobacter dissulfuricans
Comparison to close relatives: Syntrophus gentianae
Comparison to close relatives: Geomonas bemidjiensis
Comparison to close relatives: Geotalea uraniireducens
Comparison to close relatives: Geothermobacter hydrogeniphilus
Comparison to close relatives: Dissulfurimicrobium hydrothermale
Comparison to close relatives: Geobacter sulfurreducens subsp. sulfurreducens
Comparison to close relatives: Syntrophus aciditrophicus
Comparison to close relatives: Syntrophobacterium sulfatireducens
Comparison to close relatives: Geobacter grbiciae
Comparison to close relatives: Geopsychrobacter electrodiphilus
Comparison to close relatives: Pelobacter propionicus
Comparison to close relatives: Syntrophus buswellii
Comparison to close relatives: Desulfobacca acetoxidans
Comparison to close relatives: Geobacter anodireducens
Comparison to close relatives: Geobacter sulfurreducens subsp. ethanolicus
Comparison to close relatives: Desulfovirga adipica
Comparison to close relatives: Desulfuromonas michiganensis
Comparison to close relatives: Geoalkalibacter subterraneus
Comparison to close relatives: Geoalkalibacter ferrihydriticus
Comparison to close relatives: Geobacter metallireducens
Comparison to close relatives: Geobacter soli
Comparison to close relatives: Stigmatella erecta
Comparison to close relatives: Melittangium boletus
Comparison to close relatives: Geobacter pickeringii
Comparison to close relatives: Geobacter benzoatilyticus
Comparison to close relatives: Geobacter thiogenes
Comparison to close relatives: Simulacricoccus ruber
Comparison to close relatives: Syntrophotalea acetylenica
Comparison to close relatives: Trichlorobacter lovleyi
Comparison to close relatives: Desulfomonile limimaris
Comparison to close relatives: Aggregicoccus edonensis
Comparison to close relatives: Syntrophotalea acetylenivorans
Comparison to close relatives: Geobacter sulfurreducens
Comparison to close relatives: Trichlorobacter thiogenes
Comparison to close relatives: Citrifermentans bemidjiense
Carbon source: starch
CAZyme: GH94
CAZyme: GH13
CAZyme: GH0
CAZyme: GH6
CAZyme: GH23
CAZyme: GH57
CAZyme: GH77
CAZyme: GH153
CAZyme: GH28
CAZyme: GH101
CAZyme: GH105
CAZyme: GH33
CAZyme: GH3
CAZyme: GH19
CAZyme: GH1
CAZyme: GT84
CAZyme: GT13
CAZyme: GT35
CAZyme: GT51
CAZyme: GT4
CAZyme: GT22
CAZyme: GT0

GCA_001443455.1 (CAZyme)
CAZyme: GT2
Occurance: 19

GCA_001443455.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: GT5
Occurance: 2

GCA_001443455.1 (CAZyme)
CAZyme: GT28
Occurance: 6

GCA_001443455.1 (CAZyme)
CAZyme: GT1
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: GT30
Occurance: 2

GCA_001443455.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: GT9
Occurance: 4

GCA_001443455.1 (CAZyme)
CAZyme: CE4
Occurance: 4

GCA_001443455.1 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: CE11
Occurance: 9

GCA_001443455.1 (CAZyme)
CAZyme: CE12
Occurance: 2

GCA_001443455.1 (CAZyme)
CAZyme: CBM50
Occurance: 10

GCA_001443455.1 (CAZyme)
CAZyme: CBM48
Occurance: 5

GCA_001443455.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_001443455.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: CBM57
Occurance: 1

GCA_001443455.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001443455.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_001443455.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001443455.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001443455.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001443455.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001443455.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001443455.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001443455.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001443455.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001443455.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001443455.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_001443455.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001443455.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001443455.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001443455.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_001443455.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001443455.1 (Pathway)
Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC
Metabolic module: M00091

GCA_001443455.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001443455.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001443455.1 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCA_001443455.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_001443455.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_001443455.1 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_001443455.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001443455.1 (Pathway)
Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Metabolic module: M00569

GCA_001443455.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_001443455.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001443455.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001443455.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001443455.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001443455.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_001443455.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_001443455.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_001443455.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001443455.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001443455.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001443455.1 (Pathway)
Pathway: beta-Oxidation
Metabolic module: M00087

GCA_001443455.1 (Pathway)
Pathway: Siroheme biosynthesis, glutamyl-tRNA => siroheme
Metabolic module: M00846

GCA_001443455.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001443455.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001443455.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001443455.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_001443455.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001443455.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001443455.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001443455.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001443455.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001443455.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_001443455.1 (Pathway)
Pathway: Nitrate reduction (dissimilatory)
Metabolic module: MF0101

GCA_001443455.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_001443455.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001443455.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001443455.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 4.7
Relative abundance (%): 0.09

GCA_001443455.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001443455.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.01

GCA_001443455.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001443455.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 1.6
Relative abundance (%): 0.02

GCA_001443455.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 1.5
Relative abundance (%): 0

GCA_001443455.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 5
Relative abundance (%): 0.4

GCA_001443455.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001443455.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 1.7
Relative abundance (%): 0.1

GCA_001443455.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_001443455.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 2.5
Relative abundance (%): 0.05

GCA_001443455.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 16.2
Relative abundance (%): 0.16

GCA_001443455.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.38

GCA_001443455.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001443455.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001443455.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001443455.1 (MAGs)
MAGs: no MAG matches found