GCA_001438005.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Methylacidiphilum caldifontis
Comparison to close relatives: Fontisphaera persica
Comparison to close relatives: Methylacidiphilum kamchatkense
Comparison to close relatives: Prosthecobacter vanneervenii
Comparison to close relatives: Limisphaera ngatamarikiensis
Comparison to close relatives: Verrucomicrobium spinosum
Comparison to close relatives: Terrimicrobium sacchariphilum
Comparison to close relatives: Opitutus terrae
Comparison to close relatives: Brevifollis gellanilyticus
Comparison to close relatives: Luteolibacter algae
Comparison to close relatives: Luteolibacter rhizosphaerae
Comparison to close relatives: Luteolibacter flavescens
Comparison to close relatives: Cephaloticoccus primus
Comparison to close relatives: Roseimicrobium gellanilyticum
Comparison to close relatives: Nibricoccus aquaticus
Comparison to close relatives: Haloferula sargassicola
Comparison to close relatives: Prosthecobacter algae
Comparison to close relatives: Prosthecobacter dejongeii
Comparison to close relatives: Luteolibacter cuticulihirudinis
Comparison to close relatives: Oceaniferula marina
Comparison to close relatives: Luteolibacter ambystomatis
Comparison to close relatives: Cephaloticoccus capnophilus
Comparison to close relatives: Phragmitibacter flavus
Comparison to close relatives: Luteolibacter luteus
Comparison to close relatives: Haloferula helveola
Comparison to close relatives: Luteolibacter marinus
Comparison to close relatives: Prosthecobacter fluviatilis
Comparison to close relatives: Luteolibacter luojiensis
Comparison to close relatives: Prosthecobacter fusiformis
Comparison to close relatives: Rariglobus hedericola
Comparison to close relatives: Haloferula phyci
Comparison to close relatives: Luteolibacter arcticus
Comparison to close relatives: Roseibacillus ponti
Comparison to close relatives: Haloferula luteola
Comparison to close relatives: Geminisphaera colitermitum
Comparison to close relatives: Rubritalea sabuli
Comparison to close relatives: Rubritalea squalenifaciens
Comparison to close relatives: Haloferula rosea
Comparison to close relatives: Rubritalea halochordaticola
Comparison to close relatives: Rubritalea spongiae
Comparison to close relatives: Roseibacillus persicicus
Comparison to close relatives: Luteolibacter yonseiensis
Comparison to close relatives: Haloferula harenae
Comparison to close relatives: Alterococcus agarolyticus
Comparison to close relatives: Persicirhabdus sediminis
Comparison to close relatives: Luteolibacter pohnpeiensis
Comparison to close relatives: Oleiharenicola lentus
Comparison to close relatives: Prosthecobacter debontii
Comparison to close relatives: Luteolibacter gellanilyticus
Comparison to close relatives: Roseibacillus ishigakijimensis
Carbon source: starch
Carbon source: cellulose
CAZyme: GH141
CAZyme: GH2
CAZyme: GH29
CAZyme: GH6
CAZyme: GH5
CAZyme: GH95
CAZyme: GH117
CAZyme: GH13
CAZyme: GH57
CAZyme: GH28
CAZyme: GH30
CAZyme: GH1
CAZyme: GH130
CAZyme: GH77
CAZyme: GH33
CAZyme: GH139
CAZyme: GH0
CAZyme: GH19
CAZyme: GH73
CAZyme: GH23
CAZyme: GT13
CAZyme: GT2
CAZyme: GT4
CAZyme: GT28

GCA_001438005.1 (CAZyme)
CAZyme: GT1
Occurance: 2

GCA_001438005.1 (CAZyme)
CAZyme: GT35
Occurance: 2

GCA_001438005.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: GT83
Occurance: 3

GCA_001438005.1 (CAZyme)
CAZyme: GT9
Occurance: 3

GCA_001438005.1 (CAZyme)
CAZyme: CE6
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: CE4
Occurance: 3

GCA_001438005.1 (CAZyme)
CAZyme: CE11
Occurance: 2

GCA_001438005.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: CBM50
Occurance: 2

GCA_001438005.1 (CAZyme)
CAZyme: CBM66
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: CBM12
Occurance: 1

GCA_001438005.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_001438005.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001438005.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001438005.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001438005.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001438005.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_001438005.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_001438005.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001438005.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001438005.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001438005.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_001438005.1 (Pathway)
Pathway: Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Metabolic module: M00046

GCA_001438005.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001438005.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001438005.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001438005.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001438005.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001438005.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001438005.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001438005.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_001438005.1 (Pathway)
Pathway: Assimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00531

GCA_001438005.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001438005.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001438005.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001438005.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001438005.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001438005.1 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_001438005.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001438005.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_001438005.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_001438005.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_001438005.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001438005.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001438005.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001438005.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001438005.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_001438005.1 (Pathway)
Pathway: Glutamine degradation I
Metabolic module: MF0046

GCA_001438005.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001438005.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001438005.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001438005.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 25.6
Relative abundance (%): 0.4

GCA_001438005.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 1.5
Relative abundance (%): 0.13

GCA_001438005.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001438005.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.06

GCA_001438005.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 5.7
Relative abundance (%): 0.42

GCA_001438005.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001438005.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001438005.1 (MAGs)
MAGs: no MAG matches found