GCA_001417715.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Bacteroides nordii
Comparison to close relatives: Dysgonomonas hofstadii
Comparison to close relatives: Bacteroides salyersiae
Comparison to close relatives: Parabacteroides goldsteinii
Comparison to close relatives: Bacteroides cellulosilyticus
Comparison to close relatives: Bacteroides acidifaciens
Comparison to close relatives: Parabacteroides chongii
Comparison to close relatives: Bacteroides fragilis
Comparison to close relatives: Bacteroides intestinalis
Comparison to close relatives: Barnesiella propionica
Comparison to close relatives: Bacteroides muris
Comparison to close relatives: Dysgonomonas termitidis
Comparison to close relatives: Bacteroides stercorirosoris
Comparison to close relatives: Dysgonomonas gadei
Comparison to close relatives: Parabacteroides faecis
Comparison to close relatives: Bacteroides luhongzhouii
Comparison to close relatives: Parabacteroides chartae
Comparison to close relatives: Bacteroides faecis
Comparison to close relatives: Bacteroides finegoldii
Comparison to close relatives: Dysgonomonas oryzarvi
Comparison to close relatives: Dysgonomonas mossii
Comparison to close relatives: Dysgonomonas capnocytophagoides
Comparison to close relatives: Parabacteroides gordonii
Comparison to close relatives: Bacteroides xylanisolvens
Comparison to close relatives: Bacteroides zhangwenhongii
Comparison to close relatives: Macellibacteroides fermentans
Comparison to close relatives: Bacteroides caecimuris
Comparison to close relatives: Parabacteroides distasonis
Comparison to close relatives: Bacteroides ovatus
Comparison to close relatives: Parabacteroides chinchillae
Comparison to close relatives: Bacteroides caccae
Comparison to close relatives: Petrimonas mucosa
Comparison to close relatives: Bacteroides graminisolvens
Comparison to close relatives: Phocaeicola fibrisolvens
Comparison to close relatives: Paludibacter propionicigenes
Comparison to close relatives: Bacteroides eggerthii
Comparison to close relatives: Parabacteroides merdae
Comparison to close relatives: Bacteroides stercoris
Comparison to close relatives: Parabacteroides johnsonii
Comparison to close relatives: Proteiniphilum propionicum
Comparison to close relatives: Bacteroides luti
Comparison to close relatives: Bacteroides rodentium
Comparison to close relatives: Bacteroides uniformis
Comparison to close relatives: Coprobacter tertius
Comparison to close relatives: Parabacteroides leei
Comparison to close relatives: Tannerella forsythia
Comparison to close relatives: Bacteroides coprosuis
Comparison to close relatives: Fermentimonas caenicola
Comparison to close relatives: Proteiniphilum acetatigenes
Comparison to close relatives: Seramator thermalis
Comparison to close relatives: Bacteroides hominis
Carbon source: starch
CAZyme: GH2
CAZyme: GH13
CAZyme: GH0
CAZyme: GH35
CAZyme: GH92
CAZyme: GH3
CAZyme: GH146
CAZyme: GH20
CAZyme: GH38
CAZyme: GH6
CAZyme: GH51
CAZyme: GH5
CAZyme: GH36
CAZyme: GH31
CAZyme: GH16
CAZyme: GH127
CAZyme: GH28
CAZyme: GH133
CAZyme: GH59
CAZyme: GH97
CAZyme: GH11
CAZyme: GH77
CAZyme: GH120
CAZyme: GH43

GCA_001417715.1 (CAZyme)
CAZyme: GH23
Occurance: 4

GCA_001417715.1 (CAZyme)
CAZyme: GH63
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: GH101
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GH32
Occurance: 4

GCA_001417715.1 (CAZyme)
CAZyme: GH105
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GH142
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: GH27
Occurance: 3

GCA_001417715.1 (CAZyme)
CAZyme: GH57
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GH88
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GH42
Occurance: 3

GCA_001417715.1 (CAZyme)
CAZyme: GH110
Occurance: 3

GCA_001417715.1 (CAZyme)
CAZyme: GH109
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: GH33
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GH73
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GH19
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: GT2
Occurance: 26

GCA_001417715.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT32
Occurance: 3

GCA_001417715.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT4
Occurance: 26

GCA_001417715.1 (CAZyme)
CAZyme: GT3
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT28
Occurance: 3

GCA_001417715.1 (CAZyme)
CAZyme: GT30
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: GT1
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT8
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: GT0
Occurance: 4

GCA_001417715.1 (CAZyme)
CAZyme: GT10
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: GT11
Occurance: 3

GCA_001417715.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT14
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: CE11
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: CBM32
Occurance: 8

GCA_001417715.1 (CAZyme)
CAZyme: CBM57
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: CBM50
Occurance: 14

GCA_001417715.1 (CAZyme)
CAZyme: CBM13
Occurance: 7

GCA_001417715.1 (CAZyme)
CAZyme: CBM66
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: CBM20
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: CBM56
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: CBM48
Occurance: 3

GCA_001417715.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_001417715.1 (CAZyme)
CAZyme: CBM9
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: CBM51
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001417715.1 (CAZyme)
CAZyme: CBM0
Occurance: 2

GCA_001417715.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_001417715.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001417715.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001417715.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001417715.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001417715.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001417715.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001417715.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001417715.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001417715.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_001417715.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001417715.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001417715.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001417715.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001417715.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001417715.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001417715.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_001417715.1 (Pathway)
Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
Metabolic module: M00535

GCA_001417715.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001417715.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_001417715.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001417715.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_001417715.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001417715.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001417715.1 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_001417715.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_001417715.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001417715.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001417715.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001417715.1 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_001417715.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_001417715.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_001417715.1 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_001417715.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001417715.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001417715.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_001417715.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001417715.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001417715.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001417715.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001417715.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001417715.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.03

GCA_001417715.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001417715.1 (MAGs)
MAGs: no MAG matches found