GCA_001321855.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Brucella grignonensis
Comparison to close relatives: Kordiimonas lipolytica
Comparison to close relatives: Kordiimonas gwangyangensis
Comparison to close relatives: Brucella lupini
Comparison to close relatives: Brucella anthropi
Comparison to close relatives: Brucella cytisi
Comparison to close relatives: Ensifer alkalisoli
Comparison to close relatives: Sneathiella limimaris
Comparison to close relatives: Shinella zoogloeoides
Comparison to close relatives: Neorhizobium huautlense
Comparison to close relatives: Microvirga flavescens
Comparison to close relatives: Aurantimonas endophytica
Comparison to close relatives: Mesorhizobium norvegicum
Comparison to close relatives: Ensifer mexicanus
Comparison to close relatives: Microvirga terricola
Comparison to close relatives: Pseudemcibacter aquimaris
Comparison to close relatives: Segnochrobactrum spirostomi
Comparison to close relatives: Neorhizobium tomejilense
Comparison to close relatives: Mesorhizobium tamadayense
Comparison to close relatives: Hyphomicrobium hollandicum
Comparison to close relatives: Ensifer arboris
Comparison to close relatives: Mesorhizobium tianshanense
Comparison to close relatives: Rhizobium cellulosilyticum
Comparison to close relatives: Sneathiella marina
Comparison to close relatives: Brucella gallinifaecis
Comparison to close relatives: Endobacterium cereale
Comparison to close relatives: Bartonella apis
Comparison to close relatives: Roseospirillum parvum
Comparison to close relatives: Mesorhizobium wenxiniae
Comparison to close relatives: Ensifer canadensis
Comparison to close relatives: Mesorhizobium chacoense
Comparison to close relatives: Mariluticola halotolerans
Comparison to close relatives: Shinella lacus
Comparison to close relatives: Phyllobacterium calauticae
Comparison to close relatives: Mesorhizobium atlanticum
Comparison to close relatives: Devosia faecipullorum
Comparison to close relatives: Bartonella refiksaydamii
Comparison to close relatives: Ensifer garamanticus
Comparison to close relatives: Agrobacterium arsenijevicii
Comparison to close relatives: Agrobacterium fabacearum
Comparison to close relatives: Bartonella tribocorum
Comparison to close relatives: Bartonella doshiae
Comparison to close relatives: Agrobacterium salinitolerans
Comparison to close relatives: Agrobacterium shirazense
Comparison to close relatives: Agrobacterium tomkonis
Comparison to close relatives: Agrobacterium burrii
Comparison to close relatives: Bartonella kosoyi
Comparison to close relatives: Bartonella henselae
Comparison to close relatives: Falsochrobactrum ovis
Comparison to close relatives: Devosia honganensis
Comparison to close relatives: Sinorhizobium garamanticum
Comparison to close relatives: Sinorhizobium arboris
Comparison to close relatives: Sinorhizobium alkalisoli
Comparison to close relatives: Sinorhizobium mexicanum
CAZyme: GH23
CAZyme: GH65
CAZyme: GH28
CAZyme: GH73
CAZyme: GH13
CAZyme: GH103
CAZyme: GT4
CAZyme: GT51
CAZyme: GT2
CAZyme: GT1
CAZyme: GT28
CAZyme: GT30
CAZyme: GT9
CAZyme: CE11
CAZyme: CBM13
CAZyme: CBM50
CAZyme: CBM48
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Pathway: Ornithine biosynthesis, glutamate => ornithine
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP

GCA_001321855.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001321855.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001321855.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001321855.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001321855.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_001321855.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_001321855.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001321855.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_001321855.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001321855.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001321855.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_001321855.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1
Relative abundance (%): 0.02

GCA_001321855.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 33.2
Relative abundance (%): 0.79

GCA_001321855.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 33.3
Relative abundance (%): 2.2

GCA_001321855.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001321855.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.03

GCA_001321855.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 2.2
Relative abundance (%): 0.32

GCA_001321855.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.01

GCA_001321855.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 2.5
Relative abundance (%): 0.39

GCA_001321855.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.01

GCA_001321855.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001321855.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001321855.1 (MAGs)
MAGs: no MAG matches found