GCA_001312505.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Faecalicatena orotica
Comparison to close relatives: Sellimonas monacensis
Comparison to close relatives: Faecalicatena fissicatena
Comparison to close relatives: Roseburia hominis
Comparison to close relatives: Hespellia stercorisuis
Comparison to close relatives: Mediterraneibacter glycyrrhizinilyticus
Comparison to close relatives: Faecalicatena contorta
Comparison to close relatives: Anaerostipes amylophilus
Comparison to close relatives: Clostridium hylemonae
Comparison to close relatives: Roseburia amylophila
Comparison to close relatives: Clostridium nexile
Comparison to close relatives: Anaerosacchariphilus polymeriproducens
Comparison to close relatives: Blautia faecicola
Comparison to close relatives: Dorea acetigenes
Comparison to close relatives: Faecalicatena faecalis
Comparison to close relatives: Diplocloster agilis
Comparison to close relatives: Blautia hydrogenotrophica
Comparison to close relatives: Roseburia intestinalis
Comparison to close relatives: Blautia pseudococcoides
Comparison to close relatives: Blautia producta
Comparison to close relatives: Mediterraneibacter massiliensis
Comparison to close relatives: Hominisplanchenecus faecis
Comparison to close relatives: Eubacterium oxidoreducens
Comparison to close relatives: Brotonthovivens ammoniilytica
Comparison to close relatives: Lacrimispora celerecrescens
Comparison to close relatives: Muricoprocola aceti
Comparison to close relatives: Anaerostipes hadrus
Comparison to close relatives: Hoministercoradaptatus ammoniilyticus
Comparison to close relatives: Robinsoniella peoriensis
Comparison to close relatives: Mediterraneibacter butyricigenes
Comparison to close relatives: Faecalicatena acetigenes
Comparison to close relatives: Faecalimonas umbilicata
Comparison to close relatives: Enterocloster asparagiformis
Comparison to close relatives: Laedolimicola ammoniilytica
Comparison to close relatives: Drancourtella massiliensis
Comparison to close relatives: Clostridium scindens
Comparison to close relatives: Dorea formicigenerans
Comparison to close relatives: Oliverpabstia intestinalis
Comparison to close relatives: Agathobacter rectalis
Comparison to close relatives: Lacrimispora saccharolytica
Comparison to close relatives: Dorea ammoniilytica
Comparison to close relatives: Sellimonas catena
Comparison to close relatives: Coprococcus comes
Comparison to close relatives: Sporofaciens musculi
Comparison to close relatives: Clostridium indicum
Comparison to close relatives: Blautia hansenii
Comparison to close relatives: Faecalicatena absiana
Comparison to close relatives: Mediterraneibacter faecis
Comparison to close relatives: Hespellia porcina
Comparison to close relatives: Suonthocola fibrivorans
Comparison to close relatives: Claveliimonas monacensis
Comparison to close relatives: Blautia coccoides
Comparison to close relatives: Lacrimispora amygdalina
Carbon source: cellobiose
Carbon source: sucrose
Carbon source: starch
CAZyme: GH23
CAZyme: GH2
CAZyme: GH78
CAZyme: GH6
CAZyme: GH94
CAZyme: GH3
CAZyme: GH36
CAZyme: GH28
CAZyme: GH13
CAZyme: GH18
CAZyme: GH4
CAZyme: GH0
CAZyme: GH53
CAZyme: GH77
CAZyme: GH32
CAZyme: GH25
CAZyme: GH101
CAZyme: GH95
CAZyme: GH1
CAZyme: GH49

GCA_001312505.1 (CAZyme)
CAZyme: GH29
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH136
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH16
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: GH38
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH10
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH31
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: GH19
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH39
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH112
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH105
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GH73
Occurance: 3

GCA_001312505.1 (CAZyme)
CAZyme: GH43
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GT2
Occurance: 22

GCA_001312505.1 (CAZyme)
CAZyme: GT35
Occurance: 3

GCA_001312505.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GT4
Occurance: 26

GCA_001312505.1 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GT26
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: GT5
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: GT28
Occurance: 5

GCA_001312505.1 (CAZyme)
CAZyme: GT51
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: GT0
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: GT14
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: GT1
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: CE4
Occurance: 4

GCA_001312505.1 (CAZyme)
CAZyme: CE9
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: CBM50
Occurance: 8

GCA_001312505.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: CBM13
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001312505.1 (CAZyme)
CAZyme: CBM0
Occurance: 1

GCA_001312505.1 (CAZyme)
CAZyme: CBM48
Occurance: 6

GCA_001312505.1 (CAZyme)
CAZyme: CBM34
Occurance: 1

GCA_001312505.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001312505.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001312505.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001312505.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001312505.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001312505.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_001312505.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001312505.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001312505.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001312505.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001312505.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_001312505.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001312505.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_001312505.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001312505.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_001312505.1 (Pathway)
Pathway: Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Metabolic module: M00526

GCA_001312505.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001312505.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_001312505.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_001312505.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_001312505.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_001312505.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001312505.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001312505.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_001312505.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_001312505.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001312505.1 (Pathway)
Pathway: Fructan degradation
Metabolic module: MF0002

GCA_001312505.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_001312505.1 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_001312505.1 (Pathway)
Pathway: Sucrose degradation I
Metabolic module: MF0010

GCA_001312505.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001312505.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001312505.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001312505.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001312505.1 (Pathway)
Pathway: Threonine degradation I
Metabolic module: MF0049

GCA_001312505.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001312505.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001312505.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001312505.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001312505.1 (Pathway)
Pathway: Pyruvate:formate lyase
Metabolic module: MF0074

GCA_001312505.1 (Pathway)
Pathway: Lactaldehyde degradation
Metabolic module: MF0078

GCA_001312505.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001312505.1 (Pathway)
Pathway: Ethanol production I
Metabolic module: MF0090

GCA_001312505.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_001312505.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 2.9
Relative abundance (%): 0.1

GCA_001312505.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 2.8
Relative abundance (%): 0.13

GCA_001312505.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 7.5
Relative abundance (%): 0.18

GCA_001312505.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 4.3
Relative abundance (%): 0.03

GCA_001312505.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.02

GCA_001312505.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 34.3
Relative abundance (%): 0.18

GCA_001312505.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.64

GCA_001312505.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.6
Relative abundance (%): 0

GCA_001312505.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.01

GCA_001312505.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.03

GCA_001312505.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 1
Relative abundance (%): 0.01

GCA_001312505.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 48.1
Relative abundance (%): 0.03

GCA_001312505.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 58.3
Relative abundance (%): 0.28

GCA_001312505.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 4.8
Relative abundance (%): 0.01

GCA_001312505.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.03

GCA_001312505.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_001312505.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 11.8
Relative abundance (%): 0.93

GCA_001312505.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 8.7
Relative abundance (%): 0.06

GCA_001312505.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 55.3
Relative abundance (%): 0.88

GCA_001312505.1 (MAGs)
MAGs: ChengpingW_2017__AS45raw__bin_22.fa
Ecosystem: European_fallow_deer_(Dama_dama)

GCA_001312505.1 (MAGs)
MAGs: SRR5127686_bin.18.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1293639_bin.17.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1913084_bin.16.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1620276_bin.26.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190805_bin.56.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190948_bin.18.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR341673_bin.1.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190870_bin.18.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5275450_bin.30.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1293638_bin.25.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR209874_bin.16.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5127762_bin.19.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4408160_bin.6.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4444859_bin.4.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190589_bin.40.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR209873_bin.21.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR1761716_bin.20.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190830_bin.27.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5127467_bin.8.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR3736998_bin.17.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190897_bin.60.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4481747_bin.9.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1913087_bin.3.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR525802_bin.14.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1293897_bin.5.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1293569_bin.20.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1293572_bin.12.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4481767_bin.4.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1293571_bin.14.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR341643_bin.18.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR341710_bin.22.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5127640_bin.27.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5127405_bin.14.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190890_bin.5.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1578649_bin.52.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4481807_bin.51.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR2155358_bin.18.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190950_bin.27.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR3917619_bin.48.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190594_bin.3.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190860_bin.8.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: DRR042333_bin.11.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR525896_bin.16.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4423631_bin.38.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5275481_bin.21.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4423579_bin.44.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190824_bin.96.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR209625_bin.48.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1293641_bin.20.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4481769_bin.24.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1305902_bin.33.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: DRR042340_bin.21.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR3736985_bin.48.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190910_bin.56.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5056748_bin.32.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5127745_bin.23.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190956_bin.18.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR3736987_bin.43.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR341704_bin.14.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190595_bin.47.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR4451631_bin.15.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: SRR5057096_bin.7.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1620351_bin.25.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: ERR1190549_bin.1.fna
Ecosystem: Human

GCA_001312505.1 (MAGs)
MAGs: 3300007501_10.fna
Ecosystem: Generic

GCA_001312505.1 (MAGs)
MAGs: 3300014530_8.fna
Ecosystem: Generic

GCA_001312505.1 (MAGs)
MAGs: 3300028963_4.fna
Ecosystem: Generic

GCA_001312505.1 (MAGs)
MAGs: 3300028965_6.fna
Ecosystem: Generic