GCA_001311585.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Thermus caldifontis
Comparison to close relatives: Thermus thalpophilus
Comparison to close relatives: Thermus brevis
Comparison to close relatives: Deinococcus papagonensis
Comparison to close relatives: Truepera radiovictrix
Comparison to close relatives: Thermus igniterrae
Comparison to close relatives: Thermus scotoductus
Comparison to close relatives: Calidithermus chliarophilus
Comparison to close relatives: Deinobacterium chartae
Comparison to close relatives: Calidithermus timidus
Comparison to close relatives: Thermus oshimai
Comparison to close relatives: Calidithermus terrae
Comparison to close relatives: Thermus composti
Comparison to close relatives: Thermus hydrothermalis
Comparison to close relatives: Deinococcus pimensis
Comparison to close relatives: Thermus caldilimi
Comparison to close relatives: Meiothermus cateniformans
Comparison to close relatives: Meiothermus hypogaeus
Comparison to close relatives: Thermus thermamylovorans
Comparison to close relatives: Thermus brockianus
Comparison to close relatives: Thermus neutrinimicus
Comparison to close relatives: Thermus altitudinis
Comparison to close relatives: Thermus aquaticus
Comparison to close relatives: Thermus filiformis
Comparison to close relatives: Thermus arciformis
Comparison to close relatives: Meiothermus luteus
Comparison to close relatives: Allomeiothermus silvanus
Comparison to close relatives: Thermus caliditerrae
Comparison to close relatives: Thermus sediminis
Comparison to close relatives: Thermus albus
Comparison to close relatives: Meiothermus ruber
Comparison to close relatives: Meiothermus cerbereus
Comparison to close relatives: Thermus islandicus
Comparison to close relatives: Meiothermus rufus
Comparison to close relatives: Calidithermus roseus
Comparison to close relatives: Marinithermus hydrothermalis
Comparison to close relatives: Meiothermus taiwanensis
Comparison to close relatives: Rhabdothermus arcticus
Comparison to close relatives: Meiothermus granaticius
Comparison to close relatives: Thermus thermophilus
Comparison to close relatives: Deinococcus peraridilitoris
Comparison to close relatives: Vulcanithermus mediatlanticus
Comparison to close relatives: Deinococcus radiophilus
Comparison to close relatives: Thermus antranikianii
Comparison to close relatives: Thermus tenuipuniceus
Comparison to close relatives: Thermus tengchongensis
Comparison to close relatives: Thermus amyloliquefaciens
Comparison to close relatives: Oceanithermus profundus
Comparison to close relatives: Oceanithermus desulfurans
Comparison to close relatives: Deinococcus arcticus
Carbon source: starch
CAZyme: GH6
CAZyme: GH13
CAZyme: GH5
CAZyme: GH15
CAZyme: GH42
CAZyme: GH3
CAZyme: GH57
CAZyme: GH19
CAZyme: GH1
CAZyme: GH0
CAZyme: GH130
CAZyme: GH105
CAZyme: GH4
CAZyme: GH23
CAZyme: GH77
CAZyme: GT13
CAZyme: GT35
CAZyme: GT51
CAZyme: GT2
CAZyme: GT4
CAZyme: GT28
CAZyme: GT5
CAZyme: GT0
CAZyme: GT26
CAZyme: CE14

GCA_001311585.1 (CAZyme)
CAZyme: CE4
Occurance: 3

GCA_001311585.1 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_001311585.1 (CAZyme)
CAZyme: CBM50
Occurance: 8

GCA_001311585.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001311585.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001311585.1 (CAZyme)
CAZyme: CBM2
Occurance: 2

GCA_001311585.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001311585.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001311585.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001311585.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001311585.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001311585.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001311585.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001311585.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001311585.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001311585.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001311585.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001311585.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001311585.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001311585.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001311585.1 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_001311585.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001311585.1 (Pathway)
Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Metabolic module: M00569

GCA_001311585.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_001311585.1 (Pathway)
Pathway: Sulfur reduction, sulfur => sulfide
Metabolic module: M00986

GCA_001311585.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001311585.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001311585.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001311585.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001311585.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_001311585.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001311585.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001311585.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001311585.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001311585.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001311585.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_001311585.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 4.4
Relative abundance (%): 5.12

GCA_001311585.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.03

GCA_001311585.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.7
Relative abundance (%): 0

GCA_001311585.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 1.8
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 1.6
Relative abundance (%): 0.24

GCA_001311585.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 1.5
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.05

GCA_001311585.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 3.2
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_001311585.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1.8
Relative abundance (%): 0.15

GCA_001311585.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.02

GCA_001311585.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001311585.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001311585.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.07

GCA_001311585.1 (MAGs)
MAGs: no MAG matches found