GCA_001304225.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Syntrophotalea carbinolica
Comparison to close relatives: Calorithrix insularis
Comparison to close relatives: Syntrophotalea acetylenica
Comparison to close relatives: Geopsychrobacter electrodiphilus
Comparison to close relatives: Desulfuromonas michiganensis
Comparison to close relatives: Desulfosudis oleivorans
Comparison to close relatives: Geothermobacter hydrogeniphilus
Comparison to close relatives: Desulfobacca acetoxidans
Comparison to close relatives: Geoalkalibacter subterraneus
Comparison to close relatives: Desulfuromonas acetoxidans
Comparison to close relatives: Seleniibacterium seleniigenes
Comparison to close relatives: Streptomyces lunaelactis
Comparison to close relatives: Streptomyces rhizoryzae
Comparison to close relatives: Streptomyces turgidiscabies
Comparison to close relatives: Streptomyces paludis
Comparison to close relatives: Streptomyces griseocarneus
Comparison to close relatives: Desulfuromonas carbonis
Comparison to close relatives: Streptomyces durbertensis
Comparison to close relatives: Streptomyces alkaliterrae
Comparison to close relatives: Geomonas bemidjiensis
Comparison to close relatives: Geomonas limicola
Comparison to close relatives: Streptomyces zagrosensis
Comparison to close relatives: Streptomyces benahoarensis
Comparison to close relatives: Geotalea uraniireducens
Comparison to close relatives: Streptomyces inhibens
Comparison to close relatives: Streptomyces youssoufiensis
Comparison to close relatives: Streptomyces lydicamycinicus
Comparison to close relatives: Streptomyces roseifaciens
Comparison to close relatives: Streptomyces luteireticuli
Comparison to close relatives: Streptomyces mashuensis
Comparison to close relatives: Geobacter benzoatilyticus
Comparison to close relatives: Lujinxingia vulgaris
Comparison to close relatives: Desulfobotulus pelophilus
Comparison to close relatives: Desulfobotulus sapovorans
Comparison to close relatives: Solirubrobacter taibaiensis
Comparison to close relatives: Geobacter soli
Comparison to close relatives: Lujinxingia sediminis
Comparison to close relatives: Streptomyces genisteinicus
Comparison to close relatives: Desulfuromonas chloroethenica
Comparison to close relatives: Desulfobotulus alkaliphilus
Comparison to close relatives: Syntrophobacterium sulfatireducens
Comparison to close relatives: Deferrivibrio essentukiensis
Comparison to close relatives: Desulfocella halophila
Comparison to close relatives: Desulfobotulus mexicanus
Comparison to close relatives: Pelobacter propionicus
Comparison to close relatives: Desulfosoma caldarium
Comparison to close relatives: Geobacter anodireducens
Comparison to close relatives: Rhodothermus profundi
Comparison to close relatives: Trichlorobacter lovleyi
Comparison to close relatives: Atribacter laminatus
Comparison to close relatives: Pelobacter seleniigenes
Comparison to close relatives: Citrifermentans bemidjiense
Carbon source: starch
CAZyme: GH13
CAZyme: GH6
CAZyme: GH57
CAZyme: GH23
CAZyme: GH28
CAZyme: GH0
CAZyme: GH101
CAZyme: GH109
CAZyme: GH3
CAZyme: GH19
CAZyme: GH105
CAZyme: GT13
CAZyme: GT4
CAZyme: GT22
CAZyme: GT20
CAZyme: GT1
CAZyme: GT5
CAZyme: GT51
CAZyme: GT28
CAZyme: GT30
CAZyme: GT81
CAZyme: GT0
CAZyme: GT2

GCA_001304225.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: GT9
Occurance: 5

GCA_001304225.1 (CAZyme)
CAZyme: GT55
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: PL12
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CE11
Occurance: 4

GCA_001304225.1 (CAZyme)
CAZyme: CE4
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CBM50
Occurance: 7

GCA_001304225.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_001304225.1 (CAZyme)
CAZyme: CBM32
Occurance: 3

GCA_001304225.1 (CAZyme)
CAZyme: CBM9
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_001304225.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_001304225.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001304225.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001304225.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001304225.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001304225.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001304225.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001304225.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001304225.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001304225.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001304225.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001304225.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001304225.1 (Pathway)
Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha
Metabolic module: M01018

GCA_001304225.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001304225.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001304225.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001304225.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_001304225.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001304225.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001304225.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001304225.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001304225.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.02

GCA_001304225.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304225.1 (MAGs)
MAGs: no MAG matches found