GCA_001304035.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Caldithrix abyssi
Comparison to close relatives: Caldithrix palaeochoryensis
Comparison to close relatives: Calorithrix insularis
Comparison to close relatives: Syntrophotalea carbinolica
Comparison to close relatives: Desulfolithobacter dissulfuricans
Comparison to close relatives: Syntrophotalea acetylenica
Comparison to close relatives: Geothermobacter hydrogeniphilus
Comparison to close relatives: Seleniibacterium seleniigenes
Comparison to close relatives: Desulfogranum mediterraneum
Comparison to close relatives: Desulfuromonas acetoxidans
Comparison to close relatives: Dissulfurirhabdus thermomarina
Comparison to close relatives: Geomonas bemidjiensis
Comparison to close relatives: Geobacter pickeringii
Comparison to close relatives: Desulfuromonas carbonis
Comparison to close relatives: Desulfuromonas svalbardensis
Comparison to close relatives: Pelovirga terrestris
Comparison to close relatives: Trichlorobacter lovleyi
Comparison to close relatives: Geobacter thiogenes
Comparison to close relatives: Desulfuromonas michiganensis
Comparison to close relatives: Syntrophotalea venetiana
Comparison to close relatives: Geobacter grbiciae
Comparison to close relatives: Geomonas bremense
Comparison to close relatives: Malonomonas rubra
Comparison to close relatives: Pelobacter massiliensis
Comparison to close relatives: Geobacter metallireducens
Comparison to close relatives: Geobacter benzoatilyticus
Comparison to close relatives: Geobacter soli
Comparison to close relatives: Geotalea uraniireducens
Comparison to close relatives: Pelobacter propionicus
Comparison to close relatives: Syntrophotalea acetylenivorans
Comparison to close relatives: Desulfobulbus propionicus
Comparison to close relatives: Desulfuromusa bakii
Comparison to close relatives: Desulfuromusa ferrireducens
Comparison to close relatives: Geopsychrobacter electrodiphilus
Comparison to close relatives: Desulfobotulus sapovorans
Comparison to close relatives: Desulfuromusa succinoxidans
Comparison to close relatives: Dissulfuribacter thermophilus
Comparison to close relatives: Desulfuromusa kysingii
Comparison to close relatives: Geomesophilobacter sediminis
Comparison to close relatives: Chitinispirillum alkaliphilum
Comparison to close relatives: Desulfogranum aggregans
Comparison to close relatives: Geomonas silvestris
Comparison to close relatives: Geomonas limicola
Comparison to close relatives: Desulfobulbus rhabdoformis
Comparison to close relatives: Geobacter argillaceus
Comparison to close relatives: Oryzomonas rubra
Comparison to close relatives: Geoanaerobacter pelophilus
Comparison to close relatives: Oryzomonas japonica
Comparison to close relatives: Oryzomonas sagensis
Comparison to close relatives: Geomobilimonas luticola
Comparison to close relatives: Pelobacter seleniigenes
Comparison to close relatives: Trichlorobacter thiogenes
Comparison to close relatives: Citrifermentans bemidjiense
CAZyme: GH13
CAZyme: GH0
CAZyme: GH3
CAZyme: GH2
CAZyme: GH19
CAZyme: GH6
CAZyme: GH43
CAZyme: GH51
CAZyme: GH31
CAZyme: GH23
CAZyme: GH35
CAZyme: GH20
CAZyme: GH16
CAZyme: GH101
CAZyme: GH117
CAZyme: GH29
CAZyme: GH57
CAZyme: GH33
CAZyme: GH109
CAZyme: GT20
CAZyme: GT13
CAZyme: GT4
CAZyme: GT1

GCA_001304035.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: GT2
Occurance: 18

GCA_001304035.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: GT51
Occurance: 2

GCA_001304035.1 (CAZyme)
CAZyme: GT9
Occurance: 6

GCA_001304035.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: GT28
Occurance: 2

GCA_001304035.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: GT0
Occurance: 2

GCA_001304035.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CE6
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_001304035.1 (CAZyme)
CAZyme: CE11
Occurance: 5

GCA_001304035.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CBM50
Occurance: 6

GCA_001304035.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CBM9
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CBM48
Occurance: 4

GCA_001304035.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_001304035.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_001304035.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001304035.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001304035.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001304035.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001304035.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001304035.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001304035.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001304035.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001304035.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_001304035.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001304035.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001304035.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_001304035.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_001304035.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001304035.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_001304035.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001304035.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001304035.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001304035.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001304035.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 2.8
Relative abundance (%): 0.02

GCA_001304035.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001304035.1 (MAGs)
MAGs: no MAG matches found