GCA_001303885.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Acidothermus cellulolyticus
Comparison to close relatives: Isoptericola jiangsuensis
Comparison to close relatives: Nakamurella endophytica
Comparison to close relatives: Jatrophihabitans huperziae
Comparison to close relatives: Quadrisphaera oryzae
Comparison to close relatives: Syntrophotalea carbinolica
Comparison to close relatives: Frankia torreyi
Comparison to close relatives: Frankia alni
Comparison to close relatives: Frankia casuarinae
Comparison to close relatives: Antribacter soli
Comparison to close relatives: Frankia tisai
Comparison to close relatives: Isoptericola dokdonensis
Comparison to close relatives: Streptomyces thermoautotrophicus
Comparison to close relatives: Fodinicola feengrottensis
Comparison to close relatives: Frankia gtarii
Comparison to close relatives: Quadrisphaera setariae
Comparison to close relatives: Cellulosimicrobium fucosivorans
Comparison to close relatives: Antribacter gilvus
Comparison to close relatives: Fodinicola acaciae
Comparison to close relatives: Frankia irregularis
Comparison to close relatives: Isoptericola halotolerans
Comparison to close relatives: Frankia coriariae
Comparison to close relatives: Isoptericola chiayiensis
Comparison to close relatives: Cellulomonas hominis
Comparison to close relatives: Frankia canadensis
Comparison to close relatives: Thermosulfuriphilus ammonigenes
Comparison to close relatives: Jatrophihabitans fulvus
Comparison to close relatives: Xylanimonas allomyrinae
Comparison to close relatives: Angustibacter speluncae
Comparison to close relatives: Isoptericola croceus
Comparison to close relatives: Actinopolymorpha singaporensis
Comparison to close relatives: Angustibacter aerolatus
Comparison to close relatives: Actinotalea soli
Comparison to close relatives: Promicromonospora iranensis
Comparison to close relatives: Flavimobilis marinus
Comparison to close relatives: Actinotalea fermentans
Comparison to close relatives: Thermasporomyces composti
Comparison to close relatives: Thermosulfurimonas dismutans
Comparison to close relatives: Cellulomonas pakistanensis
Comparison to close relatives: Luteimicrobium subarcticum
Comparison to close relatives: Rubrobacter taiwanensis
Comparison to close relatives: Arthrobacter monumenti
Comparison to close relatives: Thermosulfurimonas marina
Comparison to close relatives: Thermodesulfatator autotrophicus
Comparison to close relatives: Thermaerobacter subterraneus
Comparison to close relatives: Lentzea flava
Comparison to close relatives: Thermodesulfatator atlanticus
Comparison to close relatives: Lentzea aerocolonigenes
Comparison to close relatives: Pengzhenrongella sicca
Comparison to close relatives: Carbonactinospora thermoautotrophica
Comparison to close relatives: Cellulosimicrobium composti
Comparison to close relatives: Parafrankia irregularis
Comparison to close relatives: Protofrankia coriariae
Carbon source: cellulose
CAZyme: GH2
CAZyme: GH0
CAZyme: GH13
CAZyme: GH9
CAZyme: GH38
CAZyme: GH106
CAZyme: GH39
CAZyme: GH78
CAZyme: GH148
CAZyme: GH50
CAZyme: GH116
CAZyme: GH6
CAZyme: GH44
CAZyme: GH94
CAZyme: GH65
CAZyme: GH52
CAZyme: GH3
CAZyme: GH42
CAZyme: GH151
CAZyme: GH127
CAZyme: GH5
CAZyme: GH163

GCA_001303885.1 (CAZyme)
CAZyme: GH51
Occurance: 4

GCA_001303885.1 (CAZyme)
CAZyme: GH96
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH120
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH10
Occurance: 6

GCA_001303885.1 (CAZyme)
CAZyme: GH63
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH74
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH109
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: GH105
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH140
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: GH31
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: GH1
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH33
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH16
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: GH4
Occurance: 3

GCA_001303885.1 (CAZyme)
CAZyme: GH27
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH43
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH20
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH130
Occurance: 8

GCA_001303885.1 (CAZyme)
CAZyme: GH26
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GH19
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: GH23
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT4
Occurance: 19

GCA_001303885.1 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT9
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT2
Occurance: 15

GCA_001303885.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT1
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT28
Occurance: 3

GCA_001303885.1 (CAZyme)
CAZyme: GT0
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT73
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: PL22
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CE15
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CE4
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CE7
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CE14
Occurance: 3

GCA_001303885.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CBM50
Occurance: 3

GCA_001303885.1 (CAZyme)
CAZyme: CBM2
Occurance: 8

GCA_001303885.1 (CAZyme)
CAZyme: CBM30
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: CBM44
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CBM67
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CBM51
Occurance: 6

GCA_001303885.1 (CAZyme)
CAZyme: CBM4
Occurance: 3

GCA_001303885.1 (CAZyme)
CAZyme: CBM85
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_001303885.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001303885.1 (CAZyme)
CAZyme: CBM47
Occurance: 1

GCA_001303885.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001303885.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001303885.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001303885.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001303885.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001303885.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001303885.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001303885.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_001303885.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001303885.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001303885.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001303885.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001303885.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001303885.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001303885.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001303885.1 (Pathway)
Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Metabolic module: M00569

GCA_001303885.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001303885.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001303885.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001303885.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_001303885.1 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_001303885.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001303885.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001303885.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001303885.1 (Pathway)
Pathway: NADH:ferredoxin oxidoreductase
Metabolic module: MF0069

GCA_001303885.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001303885.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001303885.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303885.1 (MAGs)
MAGs: no MAG matches found