GCA_001303705.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Thermoanaerobacter thermocopriae
Comparison to close relatives: Thermacetogenium phaeum
Comparison to close relatives: Thermaerobacter subterraneus
Comparison to close relatives: Moorella thermoacetica
Comparison to close relatives: Thermaerobacter marianensis
Comparison to close relatives: Thermaerobacter nagasakiensis
Comparison to close relatives: Streptomyces triticagri
Comparison to close relatives: Moorella caeni
Comparison to close relatives: Streptomyces smaragdinus
Comparison to close relatives: Thermaerobacter litoralis
Comparison to close relatives: Thermolithobacter carboxydivorans
Comparison to close relatives: Streptomyces coelescens
Comparison to close relatives: Streptomyces violaceoruber
Comparison to close relatives: Streptomyces violaceolatus
Comparison to close relatives: Streptomyces caelestis
Comparison to close relatives: Kitasatospora putterlickiae
Comparison to close relatives: Calditerricola yamamurae
Comparison to close relatives: Rubrobacter xylanophilus
Comparison to close relatives: Streptomyces youssoufiensis
Comparison to close relatives: Streptomyces oryziradicis
Comparison to close relatives: Streptomyces harbinensis
Comparison to close relatives: Thermolithobacter ferrireducens
Comparison to close relatives: Moorella glycerini
Comparison to close relatives: Thermosulfuriphilus ammonigenes
Comparison to close relatives: Actinomadura macrotermitis
Comparison to close relatives: Ectothiorhodospira lacustris
Comparison to close relatives: Kribbella soli
Comparison to close relatives: Thermoanaerobaculum aquaticum
Comparison to close relatives: Rubrobacter naiadicus
Comparison to close relatives: Nocardioides cremeus
Comparison to close relatives: Egibacter rhizosphaerae
Comparison to close relatives: Desulfovibrio giganteus
Comparison to close relatives: Rubrobacter calidifluminis
Comparison to close relatives: Calditerricola satsumensis
Comparison to close relatives: Desulfohalobium retbaense
Comparison to close relatives: Desulfothermus okinawensis
Comparison to close relatives: Thermodesulfatator indicus
Comparison to close relatives: Dissulfurimicrobium hydrothermale
Comparison to close relatives: Zhaonella formicivorans
Comparison to close relatives: Desulfolithobacter dissulfuricans
Comparison to close relatives: Desulfobulbus propionicus
Comparison to close relatives: Mycobacterium botniense
Comparison to close relatives: Geobacillus thermocatenulatus
Comparison to close relatives: Desulfohalovibrio reitneri
Comparison to close relatives: Desulfocurvibacter africanus subsp. uniflagellum
Comparison to close relatives: Desulfothermus naphthae
Comparison to close relatives: Desulfonatronum parangueonense
Comparison to close relatives: Deferrivibrio essentukiensis
Comparison to close relatives: Geobacillus stearothermophilus
Comparison to close relatives: Chondromyces pediculatus
Comparison to close relatives: Streptomyces tricolor
Comparison to close relatives: Actinacidiphila oryziradicis
Comparison to close relatives: Desulfocurvibacter africanus
Carbon source: starch
CAZyme: GH94
CAZyme: GH13
CAZyme: GH6
CAZyme: GH57
CAZyme: GH51
CAZyme: GH28
CAZyme: GH19
CAZyme: GH25
CAZyme: GH101
CAZyme: GH23
CAZyme: GH105
CAZyme: GH38
CAZyme: GH0
CAZyme: GT84
CAZyme: GT13
CAZyme: GT4
CAZyme: GT0
CAZyme: GT20
CAZyme: GT35
CAZyme: GT51
CAZyme: GT2
CAZyme: GT22

GCA_001303705.1 (CAZyme)
CAZyme: GT105
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: GT7
Occurance: 2

GCA_001303705.1 (CAZyme)
CAZyme: GT5
Occurance: 2

GCA_001303705.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_001303705.1 (CAZyme)
CAZyme: GT1
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: GT9
Occurance: 6

GCA_001303705.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: GT81
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: GT26
Occurance: 2

GCA_001303705.1 (CAZyme)
CAZyme: PL12
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: CE11
Occurance: 6

GCA_001303705.1 (CAZyme)
CAZyme: CE14
Occurance: 3

GCA_001303705.1 (CAZyme)
CAZyme: CE4
Occurance: 3

GCA_001303705.1 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: CBM57
Occurance: 3

GCA_001303705.1 (CAZyme)
CAZyme: CBM50
Occurance: 10

GCA_001303705.1 (CAZyme)
CAZyme: CBM2
Occurance: 2

GCA_001303705.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001303705.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: CBM48
Occurance: 3

GCA_001303705.1 (CAZyme)
CAZyme: CBM51
Occurance: 2

GCA_001303705.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_001303705.1 (CAZyme)
CAZyme: CBM9
Occurance: 1

GCA_001303705.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001303705.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001303705.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001303705.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001303705.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001303705.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001303705.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001303705.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001303705.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001303705.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001303705.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001303705.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001303705.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001303705.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_001303705.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001303705.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001303705.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001303705.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_001303705.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001303705.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001303705.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_001303705.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_001303705.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_001303705.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001303705.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001303705.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001303705.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_001303705.1 (Pathway)
Pathway: Tryptophan degradation
Metabolic module: MF0025

GCA_001303705.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001303705.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001303705.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001303705.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001303705.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001303705.1 (Pathway)
Pathway: Bifidobacterium shunt
Metabolic module: MF0065

GCA_001303705.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001303705.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001303705.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001303705.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_001303705.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_001303705.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.01

GCA_001303705.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001303705.1 (MAGs)
MAGs: 3300001782_24.fna
Ecosystem: Generic

GCA_001303705.1 (MAGs)
MAGs: 3300027893_46.fna
Ecosystem: Generic