GCA_001274695.2
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Thauera aminoaromatica
Comparison to close relatives: Nitrogeniibacter aestuarii
Comparison to close relatives: Thauera selenatis
Comparison to close relatives: Thauera aromatica
Comparison to close relatives: Zoogloea oryzae
Comparison to close relatives: Thauera mechernichensis
Comparison to close relatives: Azoarcus communis
Comparison to close relatives: Zoogloea oleivorans
Comparison to close relatives: Nitrogeniibacter mangrovi
Comparison to close relatives: Crenobacter luteus
Comparison to close relatives: Thauera propionica
Comparison to close relatives: Propionivibrio limicola
Comparison to close relatives: Pseudothauera hydrothermalis
Comparison to close relatives: Thauera phenylacetica
Comparison to close relatives: Azoarcus indigens
Comparison to close relatives: Cognatazoarcus halotolerans
Comparison to close relatives: Pseudothauera rhizosphaerae
Comparison to close relatives: Thauera sinica
Comparison to close relatives: Azoarcus olearius
Comparison to close relatives: Pseudazoarcus pumilus
Comparison to close relatives: Rhodocyclus gracilis
Comparison to close relatives: Pseudothauera nasutitermitis
Comparison to close relatives: Thauera butanivorans
Comparison to close relatives: Azovibrio restrictus
Comparison to close relatives: Cupriavidus metallidurans
Comparison to close relatives: Aromatoleum aromaticum
Comparison to close relatives: Aromatoleum buckelii
Comparison to close relatives: Aromatoleum anaerobium
Comparison to close relatives: Aromatoleum diolicum
Comparison to close relatives: Aromatoleum toluclasticum
Comparison to close relatives: Aromatoleum tolulyticum
Comparison to close relatives: Aromatoleum evansii
Comparison to close relatives: Aromatoleum petrolei
Comparison to close relatives: Aromatoleum bremense
Comparison to close relatives: Aromatoleum toluvorans
Comparison to close relatives: Azonexus fungiphilus
Comparison to close relatives: Pseudothauera lacus
Comparison to close relatives: Georgfuchsia toluolica
Comparison to close relatives: Thauera chlorobenzoica
Comparison to close relatives: Aromatoleum toluolicum
Comparison to close relatives: Thauera humireducens
Comparison to close relatives: Thauera linaloolentis
Comparison to close relatives: Thauera terpenica
Comparison to close relatives: Zoogloea dura
Comparison to close relatives: Zoogloea resiniphila
Comparison to close relatives: Methyloversatilis universalis
Comparison to close relatives: Azospira restricta
Comparison to close relatives: Zoogloea caeni
Comparison to close relatives: Sterolibacterium denitrificans
Comparison to close relatives: Annwoodia aquaesulis
Comparison to close relatives: Parazoarcus communis
Carbon source: starch
CAZyme: GH94
CAZyme: GH13
CAZyme: GH77
CAZyme: GH17
CAZyme: GH6
CAZyme: GH0
CAZyme: GH133
CAZyme: GH23
CAZyme: GH28
CAZyme: GH15
CAZyme: GH73
CAZyme: GH101
CAZyme: GH19
CAZyme: GH158
CAZyme: GH103
CAZyme: GH102
CAZyme: GH135
CAZyme: GH3
CAZyme: GH114
CAZyme: GH108
CAZyme: GH18
CAZyme: GT84
CAZyme: GT0
CAZyme: GT2

GCA_001274695.2 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT4
Occurance: 33

GCA_001274695.2 (CAZyme)
CAZyme: GT51
Occurance: 4

GCA_001274695.2 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT1
Occurance: 4

GCA_001274695.2 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_001274695.2 (CAZyme)
CAZyme: GT32
Occurance: 2

GCA_001274695.2 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT25
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT9
Occurance: 5

GCA_001274695.2 (CAZyme)
CAZyme: GT104
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT61
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: PL12
Occurance: 2

GCA_001274695.2 (CAZyme)
CAZyme: PL14
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: CE11
Occurance: 7

GCA_001274695.2 (CAZyme)
CAZyme: CE1
Occurance: 2

GCA_001274695.2 (CAZyme)
CAZyme: CE9
Occurance: 2

GCA_001274695.2 (CAZyme)
CAZyme: CE4
Occurance: 4

GCA_001274695.2 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: CBM48
Occurance: 5

GCA_001274695.2 (CAZyme)
CAZyme: CBM41
Occurance: 8

GCA_001274695.2 (CAZyme)
CAZyme: CBM20
Occurance: 4

GCA_001274695.2 (CAZyme)
CAZyme: CBM50
Occurance: 15

GCA_001274695.2 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_001274695.2 (CAZyme)
CAZyme: CBM5
Occurance: 3

GCA_001274695.2 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_001274695.2 (CAZyme)
CAZyme: CBM6
Occurance: 2

GCA_001274695.2 (CAZyme)
CAZyme: CBM2
Occurance: 2

GCA_001274695.2 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001274695.2 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001274695.2 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001274695.2 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001274695.2 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001274695.2 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001274695.2 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001274695.2 (Pathway)
Pathway: Glyoxylate cycle
Metabolic module: M00012

GCA_001274695.2 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001274695.2 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_001274695.2 (Pathway)
Pathway: Methionine biosynthesis, aspartate => homoserine => methionine
Metabolic module: M00017

GCA_001274695.2 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_001274695.2 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_001274695.2 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_001274695.2 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001274695.2 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001274695.2 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001274695.2 (Pathway)
Pathway: Methionine degradation
Metabolic module: M00035

GCA_001274695.2 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_001274695.2 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001274695.2 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001274695.2 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001274695.2 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001274695.2 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_001274695.2 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_001274695.2 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001274695.2 (Pathway)
Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC
Metabolic module: M00091

GCA_001274695.2 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001274695.2 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_001274695.2 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001274695.2 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001274695.2 (Pathway)
Pathway: Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Metabolic module: M00117

GCA_001274695.2 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_001274695.2 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001274695.2 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_001274695.2 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_001274695.2 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCA_001274695.2 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001274695.2 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_001274695.2 (Pathway)
Pathway: NADH:quinone oxidoreductase, prokaryotes
Metabolic module: M00144

GCA_001274695.2 (Pathway)
Pathway: Succinate dehydrogenase, prokaryotes
Metabolic module: M00149

GCA_001274695.2 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_001274695.2 (Pathway)
Pathway: Cytochrome c oxidase, cbb3-type
Metabolic module: M00156

GCA_001274695.2 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_001274695.2 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_001274695.2 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_001274695.2 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Metabolic module: M00364

GCA_001274695.2 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_001274695.2 (Pathway)
Pathway: Denitrification, nitrate => nitrogen
Metabolic module: M00529

GCA_001274695.2 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_001274695.2 (Pathway)
Pathway: Assimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00531

GCA_001274695.2 (Pathway)
Pathway: Benzoyl-CoA degradation, benzoyl-CoA => 3-hydroxypimeloyl-CoA
Metabolic module: M00541

GCA_001274695.2 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001274695.2 (Pathway)
Pathway: Trehalose biosynthesis, D-glucose 1P => trehalose
Metabolic module: M00565

GCA_001274695.2 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_001274695.2 (Pathway)
Pathway: Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Metabolic module: M00572

GCA_001274695.2 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_001274695.2 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001274695.2 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_001274695.2 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_001274695.2 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001274695.2 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_001274695.2 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_001274695.2 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001274695.2 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001274695.2 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001274695.2 (Pathway)
Pathway: UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Metabolic module: M01009

GCA_001274695.2 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_001274695.2 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001274695.2 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_001274695.2 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_001274695.2 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001274695.2 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_001274695.2 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_001274695.2 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => HPP => tyrosine
Metabolic module: M00025

GCA_001274695.2 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_001274695.2 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001274695.2 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_001274695.2 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001274695.2 (Pathway)
Pathway: beta-Oxidation
Metabolic module: M00087

GCA_001274695.2 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_001274695.2 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001274695.2 (Pathway)
Pathway: Alanine degradation I
Metabolic module: MF0033

GCA_001274695.2 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001274695.2 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001274695.2 (Pathway)
Pathway: Isoleucine degradation
Metabolic module: MF0036

GCA_001274695.2 (Pathway)
Pathway: Leucine degradation
Metabolic module: MF0037

GCA_001274695.2 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_001274695.2 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_001274695.2 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_001274695.2 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001274695.2 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001274695.2 (Pathway)
Pathway: Arginine degradation IV
Metabolic module: MF0054

GCA_001274695.2 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_001274695.2 (Pathway)
Pathway: Glyoxylate bypass
Metabolic module: MF0063

GCA_001274695.2 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_001274695.2 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001274695.2 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_001274695.2 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001274695.2 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_001274695.2 (Pathway)
Pathway: Lactate consumption I
Metabolic module: MF0079

GCA_001274695.2 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001274695.2 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_001274695.2 (Pathway)
Pathway: Succinate production
Metabolic module: MF0096

GCA_001274695.2 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 6.4
Relative abundance (%): 0.83

GCA_001274695.2 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.04

GCA_001274695.2 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 2.7
Relative abundance (%): 0.06

GCA_001274695.2 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 13.8
Relative abundance (%): 0.28

GCA_001274695.2 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 3.4
Relative abundance (%): 0.77

GCA_001274695.2 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 5.1
Relative abundance (%): 0.04

GCA_001274695.2 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 3.9
Relative abundance (%): 0.26

GCA_001274695.2 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 4.1
Relative abundance (%): 0.48

GCA_001274695.2 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 8.4
Relative abundance (%): 0.33

GCA_001274695.2 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 19.3
Relative abundance (%): 1.15

GCA_001274695.2 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.06

GCA_001274695.2 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 37.5
Relative abundance (%): 12.13

GCA_001274695.2 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 14
Relative abundance (%): 12.11

GCA_001274695.2 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 32.3
Relative abundance (%): 0.25

GCA_001274695.2 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 5.3
Relative abundance (%): 7.25

GCA_001274695.2 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001274695.2 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 1
Relative abundance (%): 0.08

GCA_001274695.2 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.23

GCA_001274695.2 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.33

GCA_001274695.2 (MAGs)
MAGs: no MAG matches found