GCA_001270045.2
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Sunxiuqinia elliptica
Comparison to close relatives: Mangrovibacterium lignilyticum
Comparison to close relatives: Gaoshiqia sediminis
Comparison to close relatives: Mangrovibacterium marinum
Comparison to close relatives: Sunxiuqinia rutila
Comparison to close relatives: Aquipluma nitroreducens
Comparison to close relatives: Sunxiuqinia indica
Comparison to close relatives: Mangrovibacterium diazotrophicum
Comparison to close relatives: Meniscus glaucopis
Comparison to close relatives: Sunxiuqinia faeciviva
Comparison to close relatives: Puteibacter caeruleilacunae
Comparison to close relatives: Prolixibacter bellariivorans
Comparison to close relatives: Prolixibacter denitrificans
Comparison to close relatives: Geofilum rhodophaeum
Comparison to close relatives: Breznakibacter xylanolyticus
Comparison to close relatives: Mangroviflexus xiamenensis
Comparison to close relatives: Marinilabilia salmonicolor
Comparison to close relatives: Alkalitalea saponilacus
Comparison to close relatives: Natronoflexus pectinivorans
Comparison to close relatives: Croceimicrobium hydrocarbonivorans
Comparison to close relatives: Marinilabilia rubra
Comparison to close relatives: Anaerophaga thermohalophila
Comparison to close relatives: Geofilum rubicundum
Comparison to close relatives: Carboxylicivirga mesophila
Comparison to close relatives: Carboxylicivirga flava
Comparison to close relatives: Owenweeksia hongkongensis
Comparison to close relatives: Saccharicrinis aurantiacus
Comparison to close relatives: Alkaliflexus imshenetskii
Comparison to close relatives: Lentimicrobium saccharophilum
Comparison to close relatives: Labilibacter sediminis
Comparison to close relatives: Carboxylicivirga sediminis
Comparison to close relatives: Carboxylicivirga marina
Comparison to close relatives: Phaeocystidibacter marisrubri
Comparison to close relatives: Riemerella anatipestifer
Comparison to close relatives: Flavobacterium rivuli
Comparison to close relatives: Pedobacter alpinus
Comparison to close relatives: Saccharicrinis carchari
Comparison to close relatives: Apibacter adventoris
Comparison to close relatives: Apibacter raozihei
Comparison to close relatives: Balneicella halophila
Comparison to close relatives: Alistipes inops
Comparison to close relatives: Phaeocystidibacter luteus
Comparison to close relatives: Robertkochia solimangrovi
Comparison to close relatives: Parvicella tangerina
Comparison to close relatives: Mucinivorans hirudinis
Comparison to close relatives: Flavobacterium subsaxonicum
Comparison to close relatives: Brumimicrobium mesophilum
Comparison to close relatives: Formosa algae
Comparison to close relatives: Kordia algicida
Comparison to close relatives: Robertkochia sediminum
Carbon source: starch
Carbon source: cellulose
CAZyme: GH2
CAZyme: GH13
CAZyme: GH35
CAZyme: GH0
CAZyme: GH92
CAZyme: GH115
CAZyme: GH3
CAZyme: GH31
CAZyme: GH78
CAZyme: GH77
CAZyme: GH6
CAZyme: GH20
CAZyme: GH9
CAZyme: GH95
CAZyme: GH127
CAZyme: GH29
CAZyme: GH42
CAZyme: GH43
CAZyme: GH36
CAZyme: GH148
CAZyme: GH16
CAZyme: GH67
CAZyme: GH65
CAZyme: GH33

GCA_001270045.2 (CAZyme)
CAZyme: GH5
Occurance: 7

GCA_001270045.2 (CAZyme)
CAZyme: GH144
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH11
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH133
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH10
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: GH97
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH28
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: GH44
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH123
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH15
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH30
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH23
Occurance: 4

GCA_001270045.2 (CAZyme)
CAZyme: GH105
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH101
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: GH117
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH51
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH73
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: GH154
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH32
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH76
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH109
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH125
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH140
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH57
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH88
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH53
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH130
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GH27
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH26
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH19
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH38
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GH1
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT2
Occurance: 30

GCA_001270045.2 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT32
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GT51
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT3
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT4
Occurance: 23

GCA_001270045.2 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT83
Occurance: 4

GCA_001270045.2 (CAZyme)
CAZyme: GT30
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: GT7
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT28
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: GT0
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT9
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT8
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: GT26
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: PL9
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: CE1
Occurance: 7

GCA_001270045.2 (CAZyme)
CAZyme: CE6
Occurance: 5

GCA_001270045.2 (CAZyme)
CAZyme: CE11
Occurance: 5

GCA_001270045.2 (CAZyme)
CAZyme: CE15
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: CE4
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_001270045.2 (CAZyme)
CAZyme: CBM6
Occurance: 7

GCA_001270045.2 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CBM50
Occurance: 12

GCA_001270045.2 (CAZyme)
CAZyme: CBM20
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: CBM9
Occurance: 8

GCA_001270045.2 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: CBM66
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CBM4
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CBM38
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CBM32
Occurance: 4

GCA_001270045.2 (CAZyme)
CAZyme: CBM35
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: CBM2
Occurance: 3

GCA_001270045.2 (CAZyme)
CAZyme: CBM57
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CBM51
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CBM48
Occurance: 2

GCA_001270045.2 (CAZyme)
CAZyme: CBM0
Occurance: 1

GCA_001270045.2 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_001270045.2 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001270045.2 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001270045.2 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001270045.2 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001270045.2 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001270045.2 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001270045.2 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001270045.2 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_001270045.2 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001270045.2 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001270045.2 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001270045.2 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001270045.2 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001270045.2 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001270045.2 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001270045.2 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_001270045.2 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_001270045.2 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_001270045.2 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001270045.2 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001270045.2 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001270045.2 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001270045.2 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_001270045.2 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_001270045.2 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_001270045.2 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_001270045.2 (Pathway)
Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Metabolic module: M00527

GCA_001270045.2 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_001270045.2 (Pathway)
Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
Metabolic module: M00535

GCA_001270045.2 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001270045.2 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_001270045.2 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_001270045.2 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001270045.2 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_001270045.2 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_001270045.2 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001270045.2 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_001270045.2 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001270045.2 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_001270045.2 (Pathway)
Pathway: UDP-ManNAc3NAcA biosynthesis, UDP-GlcNAc => UDP-ManNAc3NAcA
Metabolic module: M01035

GCA_001270045.2 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_001270045.2 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001270045.2 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_001270045.2 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_001270045.2 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001270045.2 (Pathway)
Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Metabolic module: M00051

GCA_001270045.2 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001270045.2 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_001270045.2 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_001270045.2 (Pathway)
Pathway: Starch degradation
Metabolic module: MF0005

GCA_001270045.2 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_001270045.2 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_001270045.2 (Pathway)
Pathway: Arabinose degradation
Metabolic module: MF0014

GCA_001270045.2 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001270045.2 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_001270045.2 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_001270045.2 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001270045.2 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_001270045.2 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_001270045.2 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001270045.2 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001270045.2 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001270045.2 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001270045.2 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_001270045.2 (Pathway)
Pathway: Arginine degradation V
Metabolic module: MF0055

GCA_001270045.2 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001270045.2 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_001270045.2 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_001270045.2 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001270045.2 (Pathway)
Pathway: Succinate production
Metabolic module: MF0096

GCA_001270045.2 (Pathway)
Pathway: Nitrate reduction (dissimilatory)
Metabolic module: MF0101

GCA_001270045.2 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.08

GCA_001270045.2 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.01

GCA_001270045.2 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 1.1
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 3.3
Relative abundance (%): 0.12

GCA_001270045.2 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 2.4
Relative abundance (%): 0.11

GCA_001270045.2 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.01

GCA_001270045.2 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.05

GCA_001270045.2 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_001270045.2 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_001270045.2 (MAGs)
MAGs: no MAG matches found