GCA_001058355.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Granulicatella adiacens
Comparison to close relatives: Granulicatella elegans
Comparison to close relatives: Granulicatella balaenopterae
Comparison to close relatives: Vagococcus coleopterorum
Comparison to close relatives: Enterococcus mundtii
Comparison to close relatives: Enterococcus gilvus
Comparison to close relatives: Bavariicoccus seileri
Comparison to close relatives: Enterococcus durans
Comparison to close relatives: Enterococcus villorum
Comparison to close relatives: Atopobacter phocae
Comparison to close relatives: Enterococcus hirae
Comparison to close relatives: Enterococcus viikkiensis
Comparison to close relatives: Enterococcus faecium
Comparison to close relatives: Enterococcus pallens
Comparison to close relatives: Isobaculum melis
Comparison to close relatives: Enterococcus devriesei
Comparison to close relatives: Enterococcus pseudoavium
Comparison to close relatives: Enterococcus larvae
Comparison to close relatives: Enterococcus florum
Comparison to close relatives: Trichococcus palustris
Comparison to close relatives: Enterococcus termitis
Comparison to close relatives: Enterococcus avium
Comparison to close relatives: Trichococcus collinsii
Comparison to close relatives: Trichococcus pasteurii
Comparison to close relatives: Enterococcus innesii
Comparison to close relatives: Enterococcus dispar
Comparison to close relatives: Enterococcus gallinarum
Comparison to close relatives: Enterococcus moraviensis
Comparison to close relatives: Enterococcus ureilyticus
Comparison to close relatives: Vagococcus proximus
Comparison to close relatives: Enterococcus phoeniculicola
Comparison to close relatives: Enterococcus malodoratus
Comparison to close relatives: Enterococcus wangshanyuanii
Comparison to close relatives: Enterococcus italicus
Comparison to close relatives: Enterococcus rotai
Comparison to close relatives: Enterococcus silesiacus
Comparison to close relatives: Carnobacterium gallinarum
Comparison to close relatives: Desemzia incerta
Comparison to close relatives: Carnobacterium inhibens subsp. inhibens
Comparison to close relatives: Carnobacterium inhibens subsp. gilichinskyi
Comparison to close relatives: Enterococcus lemanii
Comparison to close relatives: Catellicoccus marimammalium
Comparison to close relatives: Carnobacterium iners
Comparison to close relatives: Enterococcus asini
Comparison to close relatives: Vagococcus teuberi
Comparison to close relatives: Vagococcus penaei
Comparison to close relatives: Vagococcus elongatus
Comparison to close relatives: Jeotgalibaca ciconiae
Comparison to close relatives: Aerococcus urinaehominis
Comparison to close relatives: Aerococcus sanguinicola
Comparison to close relatives: Carnobacterium inhibens
Carbon source: cellobiose
Carbon source: sucrose
Carbon source: starch
CAZyme: GH84
CAZyme: GH101
CAZyme: GH13
CAZyme: GH112
CAZyme: GH31
CAZyme: GH0
CAZyme: GH28
CAZyme: GH32
CAZyme: GH6
CAZyme: GH87
CAZyme: GH77
CAZyme: GH4
CAZyme: GH10
CAZyme: GH1
CAZyme: GH29
CAZyme: GH105
CAZyme: GH16
CAZyme: GH19
CAZyme: GH73
CAZyme: GH23
CAZyme: GT13
CAZyme: GT51

GCA_001058355.1 (CAZyme)
CAZyme: GT35
Occurance: 3

GCA_001058355.1 (CAZyme)
CAZyme: GT4
Occurance: 13

GCA_001058355.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001058355.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001058355.1 (CAZyme)
CAZyme: GT2
Occurance: 11

GCA_001058355.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_001058355.1 (CAZyme)
CAZyme: GT28
Occurance: 3

GCA_001058355.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_001058355.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_001058355.1 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_001058355.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_001058355.1 (CAZyme)
CAZyme: CBM32
Occurance: 2

GCA_001058355.1 (CAZyme)
CAZyme: CBM50
Occurance: 11

GCA_001058355.1 (CAZyme)
CAZyme: CBM13
Occurance: 2

GCA_001058355.1 (CAZyme)
CAZyme: CBM48
Occurance: 2

GCA_001058355.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_001058355.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_001058355.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001058355.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001058355.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001058355.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001058355.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001058355.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001058355.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001058355.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001058355.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_001058355.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001058355.1 (Pathway)
Pathway: Ascorbate degradation, ascorbate => D-xylulose-5P
Metabolic module: M00550

GCA_001058355.1 (Pathway)
Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Metabolic module: M00569

GCA_001058355.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_001058355.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001058355.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001058355.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001058355.1 (Pathway)
Pathway: UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Metabolic module: M01009

GCA_001058355.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001058355.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_001058355.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Metabolic module: M00849

GCA_001058355.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_001058355.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001058355.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001058355.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_001058355.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001058355.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_001058355.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_001058355.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001058355.1 (Pathway)
Pathway: Pyruvate:formate lyase
Metabolic module: MF0074

GCA_001058355.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001058355.1 (Pathway)
Pathway: Ethanol production I
Metabolic module: MF0090

GCA_001058355.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_001058355.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 21.8
Relative abundance (%): 0.55

GCA_001058355.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 33.6
Relative abundance (%): 3.2

GCA_001058355.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 22
Relative abundance (%): 0.56

GCA_001058355.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 21.7
Relative abundance (%): 0.1

GCA_001058355.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 26.7
Relative abundance (%): 0.27

GCA_001058355.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 30
Relative abundance (%): 1

GCA_001058355.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 21.1
Relative abundance (%): 1.41

GCA_001058355.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 5.8
Relative abundance (%): 0.03

GCA_001058355.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 14.6
Relative abundance (%): 0.44

GCA_001058355.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 7.7
Relative abundance (%): 0.13

GCA_001058355.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 97.5
Relative abundance (%): 2.66

GCA_001058355.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 46.2
Relative abundance (%): 0.14

GCA_001058355.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 39.3
Relative abundance (%): 0.95

GCA_001058355.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 12.9
Relative abundance (%): 0.04

GCA_001058355.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 6.6
Relative abundance (%): 0.07

GCA_001058355.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 78.9
Relative abundance (%): 2.1

GCA_001058355.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 15.8
Relative abundance (%): 0.65

GCA_001058355.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 58.9
Relative abundance (%): 0.52

GCA_001058355.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 64.7
Relative abundance (%): 2.2

GCA_001058355.1 (MAGs)
MAGs: HMP_2012__SRS024441__bin_22.fa
Ecosystem: Human

GCA_001058355.1 (MAGs)
MAGs: CM_cf__CF_TNFC023IS_t3M15__bin_3.fa
Ecosystem: Human

GCA_001058355.1 (MAGs)
MAGs: HMP_2012__SRS015209__bin_1.fa
Ecosystem: Human

GCA_001058355.1 (MAGs)
MAGs: SRR2048045_bin.14.fna
Ecosystem: Human

GCA_001058355.1 (MAGs)
MAGs: SRR2048044_bin.16.fna
Ecosystem: Human

GCA_001058355.1 (MAGs)
MAGs: 3300006251_10.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300006259_22.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300006459_11.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300006462_9.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300006678_15.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007107_11.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007124_16.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007208_21.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007220_24.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007300_17.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007316_22.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007795_7.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300007966_19.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008080_16.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008098_26.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008123_14.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008148_12.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008154_12.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008269_17.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008362_15.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008406_25.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008472_11.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008524_11.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008556_9.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008581_7.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008636_24.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008660_9.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008715_20.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008747_11.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300008754_17.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300014137_8.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300014290_4.fna
Ecosystem: Generic

GCA_001058355.1 (MAGs)
MAGs: 3300014766_11.fna
Ecosystem: Generic