GCA_001054945.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Corynebacterium falsenii
Comparison to close relatives: Corynebacterium macclintockiae
Comparison to close relatives: Corynebacterium kalidii
Comparison to close relatives: Corynebacterium resistens
Comparison to close relatives: Corynebacterium variabile
Comparison to close relatives: Corynebacterium terpenotabidum
Comparison to close relatives: Corynebacterium jeikeium
Comparison to close relatives: Corynebacterium auriscanis
Comparison to close relatives: Corynebacterium bovis
Comparison to close relatives: Corynebacterium zhongnanshanii
Comparison to close relatives: Corynebacterium urealyticum
Comparison to close relatives: Corynebacterium freiburgense
Comparison to close relatives: Corynebacterium rouxii
Comparison to close relatives: Corynebacterium nuruki
Comparison to close relatives: Corynebacterium anserum
Comparison to close relatives: Corynebacterium diphtheriae subsp. lausannense
Comparison to close relatives: Corynebacterium belfantii
Comparison to close relatives: Corynebacterium ramonii
Comparison to close relatives: Corynebacterium lizhenjunii
Comparison to close relatives: Corynebacterium diphtheriae subsp. diphtheriae
Comparison to close relatives: Corynebacterium epidermidicanis
Comparison to close relatives: Corynebacterium sphenisci
Comparison to close relatives: Corynebacterium silvaticum
Comparison to close relatives: Corynebacterium ulcerans
Comparison to close relatives: Corynebacterium argentoratense
Comparison to close relatives: Corynebacterium hansenii
Comparison to close relatives: Corynebacterium poyangense
Comparison to close relatives: Corynebacterium lemuris
Comparison to close relatives: Corynebacterium flavescens
Comparison to close relatives: Corynebacterium antarcticum
Comparison to close relatives: Corynebacterium macginleyi
Comparison to close relatives: Corynebacterium phocae
Comparison to close relatives: Corynebacterium halotolerans
Comparison to close relatives: Corynebacterium kalinowskii
Comparison to close relatives: Corynebacterium qintianiae
Comparison to close relatives: Corynebacterium curieae
Comparison to close relatives: Corynebacterium yonathiae
Comparison to close relatives: Corynebacterium ulceribovis
Comparison to close relatives: Corynebacterium accolens
Comparison to close relatives: Corynebacterium leve
Comparison to close relatives: Corynebacterium marquesiae
Comparison to close relatives: Corynebacterium aurimucosum
Comparison to close relatives: Corynebacterium uberis
Comparison to close relatives: Corynebacterium tuberculostearicum
Comparison to close relatives: Corynebacterium pygosceleis
Comparison to close relatives: Corynebacterium meridianum
Comparison to close relatives: Corynebacterium faecale
Comparison to close relatives: Corynebacterium sanguinis
Comparison to close relatives: Corynebacterium callunae
Comparison to close relatives: Corynebacterium glutamicum
Comparison to close relatives: Corynebacterium diphtheriae
Carbon source: starch
CAZyme: GH13
CAZyme: GH6
CAZyme: GH65
CAZyme: GH16
CAZyme: GH28
CAZyme: GH77
CAZyme: GH32
CAZyme: GH101
CAZyme: GH25
CAZyme: GH3
CAZyme: GH23
CAZyme: GH76
CAZyme: GH0
CAZyme: GH135
CAZyme: GH19
CAZyme: GH130
CAZyme: GT53
CAZyme: GT2
CAZyme: GT13
CAZyme: GT51
CAZyme: GT4
CAZyme: GT85
CAZyme: GT1
CAZyme: GT39

GCA_001054945.1 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_001054945.1 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_001054945.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_001054945.1 (CAZyme)
CAZyme: GT20
Occurance: 2

GCA_001054945.1 (CAZyme)
CAZyme: GT87
Occurance: 1

GCA_001054945.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_001054945.1 (CAZyme)
CAZyme: GT0
Occurance: 2

GCA_001054945.1 (CAZyme)
CAZyme: CE1
Occurance: 4

GCA_001054945.1 (CAZyme)
CAZyme: CE14
Occurance: 4

GCA_001054945.1 (CAZyme)
CAZyme: CE6
Occurance: 1

GCA_001054945.1 (CAZyme)
CAZyme: CE0
Occurance: 2

GCA_001054945.1 (CAZyme)
CAZyme: CBM5
Occurance: 3

GCA_001054945.1 (CAZyme)
CAZyme: CBM50
Occurance: 4

GCA_001054945.1 (CAZyme)
CAZyme: CBM48
Occurance: 4

GCA_001054945.1 (CAZyme)
CAZyme: CBM38
Occurance: 1

GCA_001054945.1 (CAZyme)
CAZyme: CBM2
Occurance: 2

GCA_001054945.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_001054945.1 (CAZyme)
CAZyme: CBM51
Occurance: 2

GCA_001054945.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_001054945.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_001054945.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_001054945.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_001054945.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_001054945.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_001054945.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_001054945.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_001054945.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_001054945.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_001054945.1 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_001054945.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_001054945.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_001054945.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_001054945.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_001054945.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_001054945.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_001054945.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_001054945.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_001054945.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_001054945.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_001054945.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_001054945.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_001054945.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_001054945.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_001054945.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_001054945.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_001054945.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_001054945.1 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCA_001054945.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_001054945.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_001054945.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_001054945.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_001054945.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_001054945.1 (Pathway)
Pathway: UDP-Gal biosynthesis, Gal => UDP-Gal
Metabolic module: M00554

GCA_001054945.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_001054945.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_001054945.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_001054945.1 (Pathway)
Pathway: Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
Metabolic module: M00632

GCA_001054945.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_001054945.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_001054945.1 (Pathway)
Pathway: Galactofuranan biosynthesis, decaprenyl phosphate + UDP-GlcNAc (+ dTDP-Rha/UDP-Galf) => GL-5
Metabolic module: M00888

GCA_001054945.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_001054945.1 (Pathway)
Pathway: Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Metabolic module: M00926

GCA_001054945.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_001054945.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_001054945.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_001054945.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_001054945.1 (Pathway)
Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Metabolic module: M01014

GCA_001054945.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_001054945.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_001054945.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_001054945.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_001054945.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_001054945.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_001054945.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_001054945.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_001054945.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_001054945.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_001054945.1 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_001054945.1 (Pathway)
Pathway: Betaine biosynthesis, choline => betaine
Metabolic module: M00555

GCA_001054945.1 (Pathway)
Pathway: Trehalose degradation II
Metabolic module: MF0012

GCA_001054945.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_001054945.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_001054945.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_001054945.1 (Pathway)
Pathway: Isoleucine degradation
Metabolic module: MF0036

GCA_001054945.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_001054945.1 (Pathway)
Pathway: Glutamine degradation I
Metabolic module: MF0046

GCA_001054945.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_001054945.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_001054945.1 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_001054945.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_001054945.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_001054945.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_001054945.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_001054945.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_001054945.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_001054945.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_001054945.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 5.8
Relative abundance (%): 0.44

GCA_001054945.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 1.4
Relative abundance (%): 1.17

GCA_001054945.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 5.3
Relative abundance (%): 0.27

GCA_001054945.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 6.2
Relative abundance (%): 0.15

GCA_001054945.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 6.9
Relative abundance (%): 1.27

GCA_001054945.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 12.9
Relative abundance (%): 1.75

GCA_001054945.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 5.1
Relative abundance (%): 0.62

GCA_001054945.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.13

GCA_001054945.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 3.6
Relative abundance (%): 0.43

GCA_001054945.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 3.9
Relative abundance (%): 0.64

GCA_001054945.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 2
Relative abundance (%): 1.3

GCA_001054945.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 10.4
Relative abundance (%): 0.09

GCA_001054945.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 11.7
Relative abundance (%): 0.18

GCA_001054945.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 4.9
Relative abundance (%): 0.25

GCA_001054945.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 3.8
Relative abundance (%): 0.69

GCA_001054945.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 1.8
Relative abundance (%): 7.62

GCA_001054945.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 10.5
Relative abundance (%): 0.2

GCA_001054945.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 15.9
Relative abundance (%): 4.79

GCA_001054945.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 3.9
Relative abundance (%): 0.33

GCA_001054945.1 (MAGs)
MAGs: no MAG matches found