GCA_000383115.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Nisaea nitritireducens
Comparison to close relatives: Gimibacter soli
Comparison to close relatives: Stella humosa
Comparison to close relatives: Devosia epidermidihirudinis
Comparison to close relatives: Mesorhizobium alhagi
Comparison to close relatives: Stella vacuolata
Comparison to close relatives: Devosia chinhatensis
Comparison to close relatives: Fodinicurvata sediminis
Comparison to close relatives: Hypericibacter terrae
Comparison to close relatives: Kordiimonas pumila
Comparison to close relatives: Thalassobaculum salexigens
Comparison to close relatives: Sneathiella chungangensis
Comparison to close relatives: Thalassospira marina
Comparison to close relatives: Roseospirillum parvum
Comparison to close relatives: Dongia soli
Comparison to close relatives: Oricola indica
Comparison to close relatives: Thalassocola ureilytica
Comparison to close relatives: Sneathiella aquimaris
Comparison to close relatives: Tagaea marina
Comparison to close relatives: Devosia marina
Comparison to close relatives: Caedibacter caryophilus
Comparison to close relatives: Oceanibaculum nanhaiense
Comparison to close relatives: Oceanibaculum pacificum
Comparison to close relatives: Aliidongia dinghuensis
Comparison to close relatives: Oceanibaculum indicum
Comparison to close relatives: Zavarzinia marina
Comparison to close relatives: Segnochrobactrum spirostomi
Comparison to close relatives: Thalassobaculum fulvum
Comparison to close relatives: Microvirga flavescens
Comparison to close relatives: Microvirga subterranea
Comparison to close relatives: Salaquimonas pukyongi
Comparison to close relatives: Methyloferula stellata
Comparison to close relatives: Thalassobaculum litoreum
Comparison to close relatives: Beijerinckia indica subsp. indica
Comparison to close relatives: Kaistia dalseonensis
Comparison to close relatives: Ahrensia kielensis
Comparison to close relatives: Parvibaculum lavamentivorans
Comparison to close relatives: Kaistia defluvii
Comparison to close relatives: Methylocella silvestris
Comparison to close relatives: Oleiliquidispirillum nitrogeniifigens
Comparison to close relatives: Mesorhizobium norvegicum
Comparison to close relatives: Chelativorans intermedius
Comparison to close relatives: Pseudahrensia aquimaris
Comparison to close relatives: Ahrensia marina
Comparison to close relatives: Devosia psychrophila
Comparison to close relatives: Mariluticola halotolerans
Comparison to close relatives: Pseudokordiimonas caeni
Comparison to close relatives: Stappia indica
Comparison to close relatives: Phyllobacterium endophyticum
Comparison to close relatives: Devosia neptuniae
Comparison to close relatives: Beijerinckia indica
CAZyme: GH6
CAZyme: GH23
CAZyme: GH101
CAZyme: GH63
CAZyme: GH16
CAZyme: GH135
CAZyme: GH28
CAZyme: GH73
CAZyme: GH19
CAZyme: GH103
CAZyme: GH0
CAZyme: GH43
CAZyme: GT41
CAZyme: GT13
CAZyme: GT4
CAZyme: GT1
CAZyme: GT83
CAZyme: GT28
CAZyme: GT2
CAZyme: GT30
CAZyme: GT0
CAZyme: GT11
CAZyme: GT51
CAZyme: PL0
CAZyme: CE11

GCA_000383115.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_000383115.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_000383115.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_000383115.1 (CAZyme)
CAZyme: CBM50
Occurance: 4

GCA_000383115.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_000383115.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000383115.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000383115.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000383115.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000383115.1 (Pathway)
Pathway: Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Metabolic module: M00008

GCA_000383115.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000383115.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000383115.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000383115.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000383115.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000383115.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000383115.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000383115.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000383115.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000383115.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000383115.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_000383115.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000383115.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_000383115.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000383115.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000383115.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000383115.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000383115.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_000383115.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000383115.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000383115.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000383115.1 (Pathway)
Pathway: Alanine degradation I
Metabolic module: MF0033

GCA_000383115.1 (Pathway)
Pathway: Valine degradation I
Metabolic module: MF0041

GCA_000383115.1 (Pathway)
Pathway: Entner-Doudoroff pathway
Metabolic module: MF0066

GCA_000383115.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000383115.1 (Pathway)
Pathway: Lactate consumption I
Metabolic module: MF0079

GCA_000383115.1 (Pathway)
Pathway: Lactate consumption II
Metabolic module: MF0080

GCA_000383115.1 (Pathway)
Pathway: Propionate production II
Metabolic module: MF0094

GCA_000383115.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.03

GCA_000383115.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 35.8
Relative abundance (%): 0.36

GCA_000383115.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 39.3
Relative abundance (%): 0.43

GCA_000383115.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.02

GCA_000383115.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_000383115.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 2.9
Relative abundance (%): 0.13

GCA_000383115.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.01

GCA_000383115.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1.8
Relative abundance (%): 0.25

GCA_000383115.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000383115.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.02

GCA_000383115.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000383115.1 (MAGs)
MAGs: no MAG matches found