GCA_000381585.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Acidicapsa ferrireducens
Comparison to close relatives: Granulicella acidiphila
Comparison to close relatives: Terriglobus saanensis
Comparison to close relatives: Acidobacterium ailaaui
Comparison to close relatives: Terriglobus roseus
Comparison to close relatives: Granulicella sibirica
Comparison to close relatives: Acidobacterium capsulatum
Comparison to close relatives: Granulicella pectinivorans
Comparison to close relatives: Granulicella mallensis
Comparison to close relatives: Terriglobus tenax
Comparison to close relatives: Edaphobacter acidisoli
Comparison to close relatives: Paludibaculum fermentans
Comparison to close relatives: Acidicapsa acidiphila
Comparison to close relatives: Terriglobus aquaticus
Comparison to close relatives: Bryocella elongata
Comparison to close relatives: Granulicella sapmiensis
Comparison to close relatives: Silvibacterium bohemicum
Comparison to close relatives: Edaphobacter modestus
Comparison to close relatives: Edaphobacter dinghuensis
Comparison to close relatives: Acidipila rosea
Comparison to close relatives: Alloacidobacterium dinghuense
Comparison to close relatives: Occallatibacter savannae
Comparison to close relatives: Acidisarcina polymorpha
Comparison to close relatives: Edaphobacter aggregans
Comparison to close relatives: Acidicapsa ligni
Comparison to close relatives: Edaphobacter lichenicola
Comparison to close relatives: Terriglobus albidus
Comparison to close relatives: Granulicella tundricola
Comparison to close relatives: Paracidobacterium acidisoli
Comparison to close relatives: Granulicella rosea
Comparison to close relatives: Occallatibacter riparius
Comparison to close relatives: Edaphobacter bradus
Comparison to close relatives: Telmatobacter bradus
Comparison to close relatives: Terracidiphilus gabretensis
Comparison to close relatives: Silvibacterium dinghuense
Comparison to close relatives: Granulicella arctica
Comparison to close relatives: Acidicapsa dinghuensis
Comparison to close relatives: Acidicapsa borealis
Comparison to close relatives: Acidicapsa acidisoli
Comparison to close relatives: Granulicella paludicola
Comparison to close relatives: Clostridium thermopalmarium
Comparison to close relatives: Granulicella cerasi
Comparison to close relatives: Clostridium bovifaecis
Comparison to close relatives: Granulicella aggregans
Comparison to close relatives: Caloramator indicus
Comparison to close relatives: Ilyobacter delafieldii
Comparison to close relatives: Thermobrachium celere
Comparison to close relatives: Edaphobacter flagellatus
Comparison to close relatives: Bryobacter aggregatus
Comparison to close relatives: Heliobacterium chlorum
Comparison to close relatives: Pseudacidobacterium ailaaui
Carbon source: starch
Carbon source: cellulose
CAZyme: GH38
CAZyme: GH13
CAZyme: GH18
CAZyme: GH2
CAZyme: GH54
CAZyme: GH0
CAZyme: GH78
CAZyme: GH55
CAZyme: GH9
CAZyme: GH116
CAZyme: GH6
CAZyme: GH3
CAZyme: GH31
CAZyme: GH63
CAZyme: GH23
CAZyme: GH139
CAZyme: GH35
CAZyme: GH57
CAZyme: GH95
CAZyme: GH92
CAZyme: GH33
CAZyme: GH15
CAZyme: GH144

GCA_000381585.1 (CAZyme)
CAZyme: GH36
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: GH27
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: GH42
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GH20
Occurance: 5

GCA_000381585.1 (CAZyme)
CAZyme: GH19
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: GH65
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH28
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GH97
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH51
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GH59
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH146
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GH43
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: GH110
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH39
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GH154
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GH29
Occurance: 5

GCA_000381585.1 (CAZyme)
CAZyme: GH101
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH109
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: GH10
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH79
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: GH1
Occurance: 7

GCA_000381585.1 (CAZyme)
CAZyme: GH77
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH32
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: GH125
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH30
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: GH117
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH47
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH5
Occurance: 6

GCA_000381585.1 (CAZyme)
CAZyme: GH130
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GH105
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH16
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: GH76
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GH73
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT84
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT2
Occurance: 44

GCA_000381585.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT51
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: GT4
Occurance: 33

GCA_000381585.1 (CAZyme)
CAZyme: GT20
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GT1
Occurance: 10

GCA_000381585.1 (CAZyme)
CAZyme: GT83
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: GT89
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT0
Occurance: 5

GCA_000381585.1 (CAZyme)
CAZyme: GT26
Occurance: 6

GCA_000381585.1 (CAZyme)
CAZyme: GT28
Occurance: 5

GCA_000381585.1 (CAZyme)
CAZyme: GT5
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT30
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT21
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: GT8
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: GT9
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: PL0
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: PL9
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: PL12
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CE4
Occurance: 5

GCA_000381585.1 (CAZyme)
CAZyme: CE14
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: CE11
Occurance: 5

GCA_000381585.1 (CAZyme)
CAZyme: CE9
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CE1
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: CE12
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: CE16
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CBM13
Occurance: 12

GCA_000381585.1 (CAZyme)
CAZyme: CBM67
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: CBM9
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: CBM2
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: CBM26
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CBM41
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CBM50
Occurance: 8

GCA_000381585.1 (CAZyme)
CAZyme: CBM66
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CBM35
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CBM48
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: CBM20
Occurance: 2

GCA_000381585.1 (CAZyme)
CAZyme: CBM32
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: CBM51
Occurance: 3

GCA_000381585.1 (CAZyme)
CAZyme: CBM12
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CBM6
Occurance: 4

GCA_000381585.1 (CAZyme)
CAZyme: CBM4
Occurance: 1

GCA_000381585.1 (CAZyme)
CAZyme: CBM5
Occurance: 3

GCA_000381585.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_000381585.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000381585.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000381585.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000381585.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000381585.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000381585.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000381585.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000381585.1 (Pathway)
Pathway: Methionine biosynthesis, aspartate => homoserine => methionine
Metabolic module: M00017

GCA_000381585.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000381585.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000381585.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000381585.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000381585.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000381585.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000381585.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000381585.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000381585.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000381585.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000381585.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000381585.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000381585.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000381585.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_000381585.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000381585.1 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_000381585.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_000381585.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000381585.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000381585.1 (Pathway)
Pathway: UDP-Gal biosynthesis, Gal => UDP-Gal
Metabolic module: M00554

GCA_000381585.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000381585.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000381585.1 (Pathway)
Pathway: beta-Lactam resistance, Bla system
Metabolic module: M00627

GCA_000381585.1 (Pathway)
Pathway: Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
Metabolic module: M00632

GCA_000381585.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000381585.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000381585.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000381585.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_000381585.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000381585.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000381585.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000381585.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000381585.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000381585.1 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_000381585.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000381585.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000381585.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_000381585.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_000381585.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_000381585.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000381585.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000381585.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000381585.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000381585.1 (Pathway)
Pathway: beta-Oxidation
Metabolic module: M00087

GCA_000381585.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_000381585.1 (Pathway)
Pathway: Fructan degradation
Metabolic module: MF0002

GCA_000381585.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_000381585.1 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_000381585.1 (Pathway)
Pathway: Sucrose degradation I
Metabolic module: MF0010

GCA_000381585.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000381585.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000381585.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_000381585.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000381585.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000381585.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000381585.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000381585.1 (Pathway)
Pathway: Glutamine degradation I
Metabolic module: MF0046

GCA_000381585.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000381585.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000381585.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_000381585.1 (Pathway)
Pathway: Arginine degradation IV
Metabolic module: MF0054

GCA_000381585.1 (Pathway)
Pathway: Bifidobacterium shunt
Metabolic module: MF0065

GCA_000381585.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_000381585.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000381585.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_000381585.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000381585.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000381585.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_000381585.1 (Pathway)
Pathway: Succinate production
Metabolic module: MF0096

GCA_000381585.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 6.32

GCA_000381585.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.02

GCA_000381585.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.1
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000381585.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 10.2
Relative abundance (%): 0.08

GCA_000381585.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 20.2
Relative abundance (%): 0.15

GCA_000381585.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 2
Relative abundance (%): 0.07

GCA_000381585.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 1.5
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 14.9
Relative abundance (%): 0.07

GCA_000381585.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000381585.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.18

GCA_000381585.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000381585.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.05

GCA_000381585.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.11

GCA_000381585.1 (MAGs)
MAGs: no MAG matches found