GCA_000347575.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Atribacter laminatus
Comparison to close relatives: Ammonifex degensii
Comparison to close relatives: Thermodesulfitimonas autotrophica
Comparison to close relatives: Thermoanaerobacter wiegelii
Comparison to close relatives: Ammonifex thiophilus
Comparison to close relatives: Thermaerobacter marianensis
Comparison to close relatives: Thermaerobacter nagasakiensis
Comparison to close relatives: Thermaerobacter subterraneus
Comparison to close relatives: Thermaerobacter litoralis
Comparison to close relatives: Thermoanaerobacter sulfurigignens
Comparison to close relatives: Thermoanaerobacter sulfurophilus
Comparison to close relatives: Desulfothermobacter acidiphilus
Comparison to close relatives: Rubrobacter xylanophilus
Comparison to close relatives: Planifilum fulgidum
Comparison to close relatives: Thermosediminibacter oceani
Comparison to close relatives: Planifilum yunnanense
Comparison to close relatives: Hippea maritima
Comparison to close relatives: Rubrobacter naiadicus
Comparison to close relatives: Planifilum fimeticola
Comparison to close relatives: Rubrobacter calidifluminis
Comparison to close relatives: Caldimicrobium rimae
Comparison to close relatives: Caldimicrobium thiodismutans
Comparison to close relatives: Anoxybacillus geothermalis
Comparison to close relatives: Planifilum composti
Comparison to close relatives: Metabacillus kandeliae
Comparison to close relatives: Thermodesulfatator atlanticus
Comparison to close relatives: Anoxybacillus rupiensis
Comparison to close relatives: Bacillus wudalianchiensis
Comparison to close relatives: Bacillus cytotoxicus
Comparison to close relatives: Geoalkalibacter ferrihydriticus
Comparison to close relatives: Exiguobacterium antarcticum
Comparison to close relatives: Ureibacillus thermosphaericus
Comparison to close relatives: Sporosarcina highlanderae
Comparison to close relatives: Pullulanibacillus uraniitolerans
Comparison to close relatives: Melghirimyces thermohalophilus
Comparison to close relatives: Thermaerobacter composti
Comparison to close relatives: Exiguobacterium sibiricum
Comparison to close relatives: Fervidibacillus halotolerans
Comparison to close relatives: Listeria costaricensis
Comparison to close relatives: Exiguobacterium undae
Comparison to close relatives: Exiguobacterium acetylicum
Comparison to close relatives: Thermosulfurimonas marina
Comparison to close relatives: Novibacillus thermophilus
Comparison to close relatives: Bacillus capparidis
Comparison to close relatives: Geomonas bemidjiensis
Comparison to close relatives: Listeria seeligeri
Comparison to close relatives: Enterococcus moraviensis
Comparison to close relatives: Geobacter metallireducens
Comparison to close relatives: Acetonema longum
Comparison to close relatives: Geotalea uraniireducens
Comparison to close relatives: Citrifermentans bemidjiense
Carbon source: starch
CAZyme: GH13
CAZyme: GH2
CAZyme: GH51
CAZyme: GH6
CAZyme: GH38
CAZyme: GH77
CAZyme: GH31
CAZyme: GH23
CAZyme: GH42
CAZyme: GH127
CAZyme: GH3
CAZyme: GH57
CAZyme: GH4
CAZyme: GH49
CAZyme: GH29
CAZyme: GH43
CAZyme: GH35
CAZyme: GH16
CAZyme: GH1
CAZyme: GH10
CAZyme: GH0
CAZyme: GH130
CAZyme: GH19
CAZyme: GH12

GCA_000347575.1 (CAZyme)
CAZyme: GH105
Occurance: 6

GCA_000347575.1 (CAZyme)
CAZyme: GT13
Occurance: 2

GCA_000347575.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: GT2
Occurance: 12

GCA_000347575.1 (CAZyme)
CAZyme: GT51
Occurance: 2

GCA_000347575.1 (CAZyme)
CAZyme: GT4
Occurance: 15

GCA_000347575.1 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: GT39
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: GT1
Occurance: 2

GCA_000347575.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_000347575.1 (CAZyme)
CAZyme: GT0
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: GT26
Occurance: 3

GCA_000347575.1 (CAZyme)
CAZyme: CE6
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: CE11
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: CE4
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: CBM50
Occurance: 8

GCA_000347575.1 (CAZyme)
CAZyme: CBM48
Occurance: 4

GCA_000347575.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_000347575.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: CBM64
Occurance: 1

GCA_000347575.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000347575.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_000347575.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000347575.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000347575.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000347575.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000347575.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000347575.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000347575.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000347575.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000347575.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000347575.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000347575.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000347575.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000347575.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000347575.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000347575.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000347575.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000347575.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000347575.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000347575.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000347575.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000347575.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000347575.1 (Pathway)
Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Metabolic module: M00527

GCA_000347575.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000347575.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_000347575.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000347575.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000347575.1 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_000347575.1 (Pathway)
Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Metabolic module: M00916

GCA_000347575.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000347575.1 (Pathway)
Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Metabolic module: M00896

GCA_000347575.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000347575.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_000347575.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000347575.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000347575.1 (Pathway)
Pathway: C1-unit interconversion, prokaryotes
Metabolic module: M00140

GCA_000347575.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_000347575.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_000347575.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000347575.1 (Pathway)
Pathway: Xylose degradation
Metabolic module: MF0021

GCA_000347575.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000347575.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000347575.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_000347575.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000347575.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000347575.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000347575.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.6
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000347575.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000347575.1 (MAGs)
MAGs: GCA_011370655.1_ASM1137065v1_genomic.fna
Ecosystem: Hydrothermal sediment