GCA_000283575.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Oscillibacter valericigenes
Comparison to close relatives: Oscillibacter ruminantium
Comparison to close relatives: Oscillibacter hominis
Comparison to close relatives: Dysosmobacter acutus
Comparison to close relatives: Oscillibacter acetigenes
Comparison to close relatives: Dysosmobacter welbionis
Comparison to close relatives: Pusillibacter faecalis
Comparison to close relatives: Dysosmobacter hominis
Comparison to close relatives: Vescimonas fastidiosa
Comparison to close relatives: Vescimonas coprocola
Comparison to close relatives: Hominicoprocola fusiformis
Comparison to close relatives: Intestinimonas aquisgranensis
Comparison to close relatives: Flavonifractor plautii
Comparison to close relatives: Intestinimonas butyriciproducens
Comparison to close relatives: Intestinimonas massiliensis
Comparison to close relatives: Lawsonibacter asaccharolyticus
Comparison to close relatives: Pseudoflavonifractor capillosus
Comparison to close relatives: Pseudoflavonifractor gallinarum
Comparison to close relatives: Lawsonibacter hominis
Comparison to close relatives: Lawsonibacter faecis
Comparison to close relatives: Pseudoflavonifractor hominis
Comparison to close relatives: Flintibacter muris
Comparison to close relatives: Lawsonibacter celer
Comparison to close relatives: Muriventricola aceti
Comparison to close relatives: Sporobacter termitidis
Comparison to close relatives: Flintibacter hominis
Comparison to close relatives: Clostridium viride
Comparison to close relatives: Agathobaculum ammoniilyticum
Comparison to close relatives: Pseudobacteroides cellulosolvens
Comparison to close relatives: Butyricicoccus porcorum
Comparison to close relatives: Clostridium methylpentosum
Comparison to close relatives: Eubacterium siraeum
Comparison to close relatives: Hydrogeniiclostridium mannosilyticum
Comparison to close relatives: Hominimerdicola aceti
Comparison to close relatives: Acetivibrio aldrichii
Comparison to close relatives: Hominenteromicrobium mulieris
Comparison to close relatives: Huintestinicola butyrica
Comparison to close relatives: Acetivibrio thermocellus
Comparison to close relatives: Ructibacterium gallinarum
Comparison to close relatives: Butyricicoccus pullicaecorum
Comparison to close relatives: Monoglobus pectinilyticus
Comparison to close relatives: Caproicibacter fermentans
Comparison to close relatives: Agathobaculum desmolans
Comparison to close relatives: Hydrogenoanaerobacterium saccharovorans
Comparison to close relatives: Massiliimalia massiliensis
Comparison to close relatives: Clostridium leptum
Comparison to close relatives: Acutalibacter muris
Comparison to close relatives: Massiliimalia timonensis
Comparison to close relatives: Ruthenibacterium lactatiformans
Comparison to close relatives: Thermocaproicibacter melissae
Carbon source: starch
CAZyme: GH13
CAZyme: GH6
CAZyme: GH28
CAZyme: GH0
CAZyme: GH25
CAZyme: GH18
CAZyme: GH77
CAZyme: GH3
CAZyme: GH33
CAZyme: GH16
CAZyme: GH24
CAZyme: GH43
CAZyme: GH38
CAZyme: GH19
CAZyme: GH23
CAZyme: GT2
CAZyme: GT4
CAZyme: GT51
CAZyme: GT13
CAZyme: GT35
CAZyme: GT28
CAZyme: GT5
CAZyme: GT22
CAZyme: GT32
CAZyme: GT1

GCA_000283575.1 (CAZyme)
CAZyme: GT0
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: PL12
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: CE9
Occurance: 2

GCA_000283575.1 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: CE4
Occurance: 5

GCA_000283575.1 (CAZyme)
CAZyme: CBM54
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: CBM50
Occurance: 20

GCA_000283575.1 (CAZyme)
CAZyme: CBM48
Occurance: 5

GCA_000283575.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000283575.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000283575.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000283575.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000283575.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000283575.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000283575.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000283575.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000283575.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000283575.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000283575.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000283575.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000283575.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000283575.1 (Pathway)
Pathway: V/A-type ATPase, prokaryotes
Metabolic module: M00159

GCA_000283575.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000283575.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000283575.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000283575.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_000283575.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000283575.1 (Pathway)
Pathway: Vancomycin resistance, D-Ala-D-Ser type
Metabolic module: M00652

GCA_000283575.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000283575.1 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_000283575.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000283575.1 (Pathway)
Pathway: Guanine ribonucleotide degradation, GMP => Urate
Metabolic module: M00959

GCA_000283575.1 (Pathway)
Pathway: Adenine ribonucleotide degradation, AMP => Urate
Metabolic module: M00958

GCA_000283575.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000283575.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000283575.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_000283575.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000283575.1 (Pathway)
Pathway: Histidine biosynthesis, PRPP => histidine
Metabolic module: M00026

GCA_000283575.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000283575.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000283575.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000283575.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000283575.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000283575.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000283575.1 (Pathway)
Pathway: Methionine degradation II
Metabolic module: MF0039

GCA_000283575.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000283575.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000283575.1 (Pathway)
Pathway: Glutamine degradation I
Metabolic module: MF0046

GCA_000283575.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000283575.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000283575.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000283575.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_000283575.1 (Pathway)
Pathway: Arginine degradation V
Metabolic module: MF0055

GCA_000283575.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000283575.1 (Pathway)
Pathway: Lactate consumption II
Metabolic module: MF0080

GCA_000283575.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000283575.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_000283575.1 (Pathway)
Pathway: Propionate production II
Metabolic module: MF0094

GCA_000283575.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.02

GCA_000283575.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 2.9
Relative abundance (%): 1.48

GCA_000283575.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.47

GCA_000283575.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.3
Relative abundance (%): 0.01

GCA_000283575.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.11

GCA_000283575.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 9.3
Relative abundance (%): 1.33

GCA_000283575.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 5.1
Relative abundance (%): 0.2

GCA_000283575.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.04

GCA_000283575.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.25

GCA_000283575.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.03

GCA_000283575.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000283575.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 5.6
Relative abundance (%): 0.1

GCA_000283575.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 8.5
Relative abundance (%): 0.03

GCA_000283575.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.02

GCA_000283575.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1
Relative abundance (%): 0.02

GCA_000283575.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000283575.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 2.5
Relative abundance (%): 0.13

GCA_000283575.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000283575.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 5
Relative abundance (%): 0.36

GCA_000283575.1 (MAGs)
MAGs: no MAG matches found