GCA_000238975.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Pectobacterium fontis
Comparison to close relatives: Klebsiella variicola subsp. variicola
Comparison to close relatives: Klebsiella pneumoniae subsp. pneumoniae
Comparison to close relatives: Enterobacter chengduensis
Comparison to close relatives: Klebsiella aerogenes
Comparison to close relatives: Klebsiella pasteurii
Comparison to close relatives: Serratia inhibens
Comparison to close relatives: Pectobacterium quasiaquaticum
Comparison to close relatives: Klebsiella spallanzanii
Comparison to close relatives: Enterobacter soli
Comparison to close relatives: Pectobacterium brasiliense
Comparison to close relatives: Enterobacter sichuanensis
Comparison to close relatives: Enterobacter dykesii
Comparison to close relatives: Serratia marcescens
Comparison to close relatives: Pectobacterium versatile
Comparison to close relatives: Serratia plymuthica
Comparison to close relatives: Huaxiibacter chinensis
Comparison to close relatives: Enterobacter roggenkampii
Comparison to close relatives: Enterobacter vonholyi
Comparison to close relatives: Cronobacter condimenti
Comparison to close relatives: Serratia liquefaciens
Comparison to close relatives: Serratia entomophila
Comparison to close relatives: Serratia ficaria
Comparison to close relatives: Enterobacter chuandaensis
Comparison to close relatives: Enterobacter hormaechei subsp. xiangfangensis
Comparison to close relatives: Symbiopectobacterium purcellii
Comparison to close relatives: Serratia odorifera
Comparison to close relatives: Serratia nematodiphila
Comparison to close relatives: Citrobacter portucalensis
Comparison to close relatives: Enterobacter wuhouensis
Comparison to close relatives: Yokenella regensburgei
Comparison to close relatives: Citrobacter meridianamericanus
Comparison to close relatives: Dickeya lacustris
Comparison to close relatives: Enterobacter quasihormaechei
Comparison to close relatives: Enterobacter quasiroggenkampii
Comparison to close relatives: Pectobacterium betavasculorum
Comparison to close relatives: Enterobacter hormaechei subsp. hoffmannii
Comparison to close relatives: Pectobacterium polaris
Comparison to close relatives: Rouxiella badensis
Comparison to close relatives: Kluyvera ascorbata
Comparison to close relatives: Enterobacter quasimori
Comparison to close relatives: Citrobacter murliniae
Comparison to close relatives: Pectobacterium atrosepticum
Comparison to close relatives: Escherichia ruysiae
Comparison to close relatives: Citrobacter braakii
Comparison to close relatives: Rouxiella silvae
Comparison to close relatives: Kosakonia quasisacchari
Comparison to close relatives: Pseudocitrobacter vendiensis
Comparison to close relatives: Pectobacterium punjabense
Comparison to close relatives: Ewingella americana
Comparison to close relatives: Klebsiella pneumoniae
Comparison to close relatives: Enterobacter hormaechei
Comparison to close relatives: Pectobacterium carotovorum
Comparison to close relatives: Klebsiella variicola
CAZyme: GH13
CAZyme: GH6
CAZyme: GH4
CAZyme: GH28
CAZyme: GH73
CAZyme: GH102
CAZyme: GH23
CAZyme: GH19
CAZyme: GT13
CAZyme: GT51
CAZyme: GT4
CAZyme: GT22
CAZyme: GT1
CAZyme: GT28
CAZyme: GT9
CAZyme: GT30
CAZyme: GT2
CAZyme: GT19
CAZyme: GT8
CAZyme: CE11
CAZyme: CBM13
CAZyme: CBM50

GCA_000238975.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000238975.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000238975.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000238975.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000238975.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000238975.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000238975.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000238975.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000238975.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000238975.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000238975.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000238975.1 (Pathway)
Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Metabolic module: M00064

GCA_000238975.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000238975.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000238975.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_000238975.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000238975.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000238975.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000238975.1 (Pathway)
Pathway: Cytochrome o ubiquinol oxidase
Metabolic module: M00417

GCA_000238975.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000238975.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_000238975.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000238975.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000238975.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000238975.1 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_000238975.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000238975.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_000238975.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_000238975.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000238975.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000238975.1 (Pathway)
Pathway: Fructose degradation
Metabolic module: MF0015

GCA_000238975.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_000238975.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_000238975.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000238975.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_000238975.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000238975.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.04

GCA_000238975.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.9
Relative abundance (%): 8.9

GCA_000238975.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.03

GCA_000238975.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.01

GCA_000238975.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.6
Relative abundance (%): 1.1

GCA_000238975.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 2
Relative abundance (%): 2.37

GCA_000238975.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 2.62

GCA_000238975.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000238975.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238975.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.1

GCA_000238975.1 (MAGs)
MAGs: no MAG matches found