GCA_000238815.2
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Ferirhizobium litorale
Comparison to close relatives: Azospirillum thermophilum
Comparison to close relatives: Magnetospirillum moscoviense
Comparison to close relatives: Gimibacter soli
Comparison to close relatives: Thalassobaculum litoreum
Comparison to close relatives: Magnetospirillum molischianum
Comparison to close relatives: Oleisolibacter albus
Comparison to close relatives: Magnetospirillum bellicum
Comparison to close relatives: Thalassobaculum fulvum
Comparison to close relatives: Hoeflea phototrophica
Comparison to close relatives: Oleiliquidispirillum nitrogeniifigens
Comparison to close relatives: Zavarzinia marina
Comparison to close relatives: Azospirillum argentinense
Comparison to close relatives: Azospirillum formosense
Comparison to close relatives: Nisaea nitritireducens
Comparison to close relatives: Dongia rigui
Comparison to close relatives: Ahrensia marina
Comparison to close relatives: Azospirillum picis
Comparison to close relatives: Pelagibius marinus
Comparison to close relatives: Agrobacterium rosae
Comparison to close relatives: Devosia honganensis
Comparison to close relatives: Stella humosa
Comparison to close relatives: Devosia sediminis
Comparison to close relatives: Ahrensia kielensis
Comparison to close relatives: Dongia soli
Comparison to close relatives: Azospirillum lipoferum
Comparison to close relatives: Devosia salina
Comparison to close relatives: Devosia neptuniae
Comparison to close relatives: Devosia ureilytica
Comparison to close relatives: Hoeflea marina
Comparison to close relatives: Algihabitans albus
Comparison to close relatives: Azospirillum griseum
Comparison to close relatives: Azospirillum zeae
Comparison to close relatives: Hypericibacter terrae
Comparison to close relatives: Skermanella pratensis
Comparison to close relatives: Azospirillum canadense
Comparison to close relatives: Magnetospirillum kuznetsovii
Comparison to close relatives: Dongia mobilis
Comparison to close relatives: Oceanibaculum pacificum
Comparison to close relatives: Agrobacterium salinitolerans
Comparison to close relatives: Phyllobacterium endophyticum
Comparison to close relatives: Aliidongia dinghuensis
Comparison to close relatives: Lacibacterium aquatile
Comparison to close relatives: Hypericibacter adhaerens
Comparison to close relatives: Phyllobacterium calauticae
Comparison to close relatives: Segnochrobactrum spirostomi
Comparison to close relatives: Oceanibaculum indicum
Comparison to close relatives: Niveispirillum cyanobacteriorum
Comparison to close relatives: Oceanibaculum nanhaiense
Comparison to close relatives: Niveispirillum lacus
Comparison to close relatives: Paramagnetospirillum kuznetsovii
CAZyme: GH5
CAZyme: GH13
CAZyme: GH6
CAZyme: GH42
CAZyme: GH28
CAZyme: GH23
CAZyme: GH10
CAZyme: GH101
CAZyme: GH105
CAZyme: GH36
CAZyme: GH1
CAZyme: GH4
CAZyme: GH63
CAZyme: GH84
CAZyme: GH73
CAZyme: GH103
CAZyme: GH0
CAZyme: GH130
CAZyme: GT13
CAZyme: GT51
CAZyme: GT66
CAZyme: GT4
CAZyme: GT83
CAZyme: GT2
CAZyme: GT1

GCA_000238815.2 (CAZyme)
CAZyme: GT9
Occurance: 3

GCA_000238815.2 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_000238815.2 (CAZyme)
CAZyme: GT30
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: GT0
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: PL12
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_000238815.2 (CAZyme)
CAZyme: CE11
Occurance: 3

GCA_000238815.2 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: CBM50
Occurance: 7

GCA_000238815.2 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000238815.2 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000238815.2 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000238815.2 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000238815.2 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000238815.2 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000238815.2 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000238815.2 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000238815.2 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000238815.2 (Pathway)
Pathway: Glyoxylate cycle
Metabolic module: M00012

GCA_000238815.2 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000238815.2 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_000238815.2 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000238815.2 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000238815.2 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000238815.2 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000238815.2 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000238815.2 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000238815.2 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000238815.2 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000238815.2 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000238815.2 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000238815.2 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000238815.2 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_000238815.2 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000238815.2 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_000238815.2 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000238815.2 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_000238815.2 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000238815.2 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000238815.2 (Pathway)
Pathway: NADH:quinone oxidoreductase, prokaryotes
Metabolic module: M00144

GCA_000238815.2 (Pathway)
Pathway: Succinate dehydrogenase, prokaryotes
Metabolic module: M00149

GCA_000238815.2 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_000238815.2 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000238815.2 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000238815.2 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000238815.2 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000238815.2 (Pathway)
Pathway: Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Metabolic module: M00741

GCA_000238815.2 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000238815.2 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000238815.2 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000238815.2 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000238815.2 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_000238815.2 (Pathway)
Pathway: Adenine ribonucleotide degradation, AMP => Urate
Metabolic module: M00958

GCA_000238815.2 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000238815.2 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_000238815.2 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000238815.2 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000238815.2 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000238815.2 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000238815.2 (Pathway)
Pathway: C1-unit interconversion, prokaryotes
Metabolic module: M00140

GCA_000238815.2 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_000238815.2 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_000238815.2 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000238815.2 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000238815.2 (Pathway)
Pathway: Alanine degradation I
Metabolic module: MF0033

GCA_000238815.2 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000238815.2 (Pathway)
Pathway: Leucine degradation
Metabolic module: MF0037

GCA_000238815.2 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_000238815.2 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000238815.2 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_000238815.2 (Pathway)
Pathway: Glycerol degradation II
Metabolic module: MF0061

GCA_000238815.2 (Pathway)
Pathway: Glyoxylate bypass
Metabolic module: MF0063

GCA_000238815.2 (Pathway)
Pathway: NADH:ferredoxin oxidoreductase
Metabolic module: MF0069

GCA_000238815.2 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000238815.2 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000238815.2 (Pathway)
Pathway: Lactate consumption I
Metabolic module: MF0079

GCA_000238815.2 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_000238815.2 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.6
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 31.5
Relative abundance (%): 0.2

GCA_000238815.2 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 32.4
Relative abundance (%): 0.26

GCA_000238815.2 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.03

GCA_000238815.2 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000238815.2 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.01

GCA_000238815.2 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1.2
Relative abundance (%): 0.01

GCA_000238815.2 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000238815.2 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000238815.2 (MAGs)
MAGs: no MAG matches found