GCA_000234645.4
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Helicobacter apri
Comparison to close relatives: Helicobacter brantae
Comparison to close relatives: Wolinella succinogenes
Comparison to close relatives: Helicobacter cholecystus
Comparison to close relatives: Helicobacter anatolicus
Comparison to close relatives: Helicobacter canis
Comparison to close relatives: Helicobacter delphinicola
Comparison to close relatives: Helicobacter jaachi
Comparison to close relatives: Helicobacter mustelae
Comparison to close relatives: Helicobacter enhydrae
Comparison to close relatives: Helicobacter bilis
Comparison to close relatives: Helicobacter pullorum
Comparison to close relatives: Helicobacter anseris
Comparison to close relatives: Helicobacter colisuis
Comparison to close relatives: Helicobacter pametensis
Comparison to close relatives: Helicobacter heilmannii
Comparison to close relatives: Helicobacter suis
Comparison to close relatives: Helicobacter japonicus
Comparison to close relatives: Helicobacter rodentium
Comparison to close relatives: Helicobacter aurati
Comparison to close relatives: Helicobacter cinaedi
Comparison to close relatives: Helicobacter bizzozeronii
Comparison to close relatives: Helicobacter salomonis
Comparison to close relatives: Helicobacter pylori
Comparison to close relatives: Helicobacter muridarum
Comparison to close relatives: Helicobacter baculiformis
Comparison to close relatives: Helicobacter labacensis
Comparison to close relatives: Helicobacter equorum
Comparison to close relatives: Helicobacter mesocricetorum
Comparison to close relatives: Helicobacter kayseriensis
Comparison to close relatives: Helicobacter mehlei
Comparison to close relatives: Helicobacter canadensis
Comparison to close relatives: Helicobacter hepaticus
Comparison to close relatives: Helicobacter ganmani
Comparison to close relatives: Helicobacter kumamotonensis
Comparison to close relatives: Helicobacter acinonychis
Comparison to close relatives: Helicobacter turcicus
Comparison to close relatives: Helicobacter trogontum
Comparison to close relatives: Helicobacter cetorum
Comparison to close relatives: Helicobacter felis
Comparison to close relatives: Helicobacter ibis
Comparison to close relatives: Helicobacter vulpis
Comparison to close relatives: Helicobacter valdiviensis
Comparison to close relatives: Helicobacter marmotae
Comparison to close relatives: Helicobacter himalayensis
Comparison to close relatives: Helicobacter monodelphidis
Comparison to close relatives: Helicobacter didelphidarum
Comparison to close relatives: Helicobacter ailurogastricus
Comparison to close relatives: Campylobacter novaezeelandiae
Comparison to close relatives: Helicobacter cynogastricus
CAZyme: GH13
CAZyme: GH6
CAZyme: GH28
CAZyme: GH23
CAZyme: GH33
CAZyme: GH19
CAZyme: GT13
CAZyme: GT51
CAZyme: GT2
CAZyme: GT4
CAZyme: GT9
CAZyme: GT25
CAZyme: GT8
CAZyme: GT19
CAZyme: GT28
CAZyme: GT0
CAZyme: GT11
CAZyme: GT82
CAZyme: GT30
CAZyme: GT10
CAZyme: CE4
CAZyme: CE11
CAZyme: CBM50
CAZyme: CBM13
CAZyme: CBM5
CAZyme: CBM48

GCA_000234645.4 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000234645.4 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000234645.4 (Pathway)
Pathway: Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Metabolic module: M00008

GCA_000234645.4 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000234645.4 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000234645.4 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000234645.4 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000234645.4 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000234645.4 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000234645.4 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000234645.4 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000234645.4 (Pathway)
Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Metabolic module: M00064

GCA_000234645.4 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000234645.4 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000234645.4 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000234645.4 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_000234645.4 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000234645.4 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_000234645.4 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000234645.4 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000234645.4 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_000234645.4 (Pathway)
Pathway: KDO2-lipid A modification pathway
Metabolic module: M00867

GCA_000234645.4 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_000234645.4 (Pathway)
Pathway: Menaquinone biosynthesis, modified futalosine pathway
Metabolic module: M00931

GCA_000234645.4 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000234645.4 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000234645.4 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000234645.4 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000234645.4 (Pathway)
Pathway: CMP-Pse5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-Pse5Ac7Ac
Metabolic module: M01007

GCA_000234645.4 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_000234645.4 (Pathway)
Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Metabolic module: M00938

GCA_000234645.4 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000234645.4 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_000234645.4 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000234645.4 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000234645.4 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000234645.4 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_000234645.4 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000234645.4 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000234645.4 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000234645.4 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000234645.4 (Pathway)
Pathway: Entner-Doudoroff pathway
Metabolic module: MF0066

GCA_000234645.4 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000234645.4 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000234645.4 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000234645.4 (Pathway)
Pathway: Urea degradation
Metabolic module: MF0085

GCA_000234645.4 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000234645.4 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 1.7
Relative abundance (%): 0.01

GCA_000234645.4 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 5.2
Relative abundance (%): 1.76

GCA_000234645.4 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000234645.4 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.8
Relative abundance (%): 0

GCA_000234645.4 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.03

GCA_000234645.4 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 4.6
Relative abundance (%): 2.41

GCA_000234645.4 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 18.9
Relative abundance (%): 0.87

GCA_000234645.4 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_000234645.4 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.6
Relative abundance (%): 2.17

GCA_000234645.4 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 1
Relative abundance (%): 1.68

GCA_000234645.4 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000234645.4 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.5
Relative abundance (%): 0

GCA_000234645.4 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.31

GCA_000234645.4 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.3

GCA_000234645.4 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.46

GCA_000234645.4 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_000234645.4 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.23

GCA_000234645.4 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 7.4
Relative abundance (%): 0.1

GCA_000234645.4 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 1.8
Relative abundance (%): 10.72

GCA_000234645.4 (MAGs)
MAGs: OhJ_2014__MET0008_megahit__bin_12.fa
Ecosystem: Human