GCA_000226255.2
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Nitratidesulfovibrio liaohensis
Comparison to close relatives: Nitratidesulfovibrio oxamicus
Comparison to close relatives: Desulfovibrio longreachensis
Comparison to close relatives: Nitratidesulfovibrio termitidis
Comparison to close relatives: Nitratidesulfovibrio vulgaris
Comparison to close relatives: Desulfovibrio desulfuricans
Comparison to close relatives: Desulfovibrio porci
Comparison to close relatives: Desulfovibrio piger
Comparison to close relatives: Bilophila wadsworthia
Comparison to close relatives: Desulfovibrio simplex
Comparison to close relatives: Desulfovibrio intestinalis
Comparison to close relatives: Desulfovibrio legallii
Comparison to close relatives: Desulfolutivibrio sulfoxidireducens
Comparison to close relatives: Solidesulfovibrio magneticus
Comparison to close relatives: Solidesulfovibrio burkinensis
Comparison to close relatives: Oleidesulfovibrio vietnamensis
Comparison to close relatives: Desulfovibrio psychrotolerans
Comparison to close relatives: Oleidesulfovibrio alaskensis
Comparison to close relatives: Megalodesulfovibrio paquesii
Comparison to close relatives: Desulfovibrio cuneatus
Comparison to close relatives: Desulfocurvibacter africanus subsp. uniflagellum
Comparison to close relatives: Solidesulfovibrio marrakechensis
Comparison to close relatives: Fundidesulfovibrio agrisoli
Comparison to close relatives: Fundidesulfovibrio terrae
Comparison to close relatives: Solidesulfovibrio fructosivorans
Comparison to close relatives: Oceanidesulfovibrio marinus
Comparison to close relatives: Desulfocurvibacter africanus subsp. africanus
Comparison to close relatives: Desulfonatronum zhilinae
Comparison to close relatives: Solidesulfovibrio carbinolicus
Comparison to close relatives: Desulfonatronum parangueonense
Comparison to close relatives: Desulfonatronum thiosulfatophilum
Comparison to close relatives: Desulfovibrio giganteus
Comparison to close relatives: Fundidesulfovibrio soli
Comparison to close relatives: Solidesulfovibrio alcoholivorans
Comparison to close relatives: Oceanidesulfovibrio indonesiensis
Comparison to close relatives: Desulfonatronum thiodismutans
Comparison to close relatives: Pseudodesulfovibrio alkaliphilus
Comparison to close relatives: Desulfovibrio paquesii
Comparison to close relatives: Desulfonatronum lacustre
Comparison to close relatives: Desulfohalovibrio alkalitolerans
Comparison to close relatives: Fundidesulfovibrio magnetotacticus
Comparison to close relatives: Fundidesulfovibrio putealis
Comparison to close relatives: Pseudodesulfovibrio aespoeensis
Comparison to close relatives: Desulfonatronum thioautotrophicum
Comparison to close relatives: Humidesulfovibrio mexicanus
Comparison to close relatives: Desulfovibrio biadhensis
Comparison to close relatives: Pseudodesulfovibrio mercurii
Comparison to close relatives: Desulfocurvus thunnarius
Comparison to close relatives: Desulfocurvus vexinensis
Comparison to close relatives: Desulfobaculum senezii
Comparison to close relatives: Alkalidesulfovibrio alkalitolerans
Comparison to close relatives: Halodesulfovibrio aestuarii
Comparison to close relatives: Desulfocurvibacter africanus
Carbon source: starch
CAZyme: GH13
CAZyme: GH6
CAZyme: GH57
CAZyme: GH28
CAZyme: GH23
CAZyme: GH3
CAZyme: GH109
CAZyme: GH77
CAZyme: GH102
CAZyme: GH103
CAZyme: GH0
CAZyme: GH19
CAZyme: GH130
CAZyme: GH108
CAZyme: GT2
CAZyme: GT4
CAZyme: GT13
CAZyme: GT35
CAZyme: GT51
CAZyme: GT66
CAZyme: GT83
CAZyme: GT0

GCA_000226255.2 (CAZyme)
CAZyme: GT9
Occurance: 8

GCA_000226255.2 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: GT1
Occurance: 4

GCA_000226255.2 (CAZyme)
CAZyme: GT7
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: GT30
Occurance: 2

GCA_000226255.2 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_000226255.2 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: GT70
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: GT8
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: PL12
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: CE11
Occurance: 9

GCA_000226255.2 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_000226255.2 (CAZyme)
CAZyme: CBM41
Occurance: 4

GCA_000226255.2 (CAZyme)
CAZyme: CBM50
Occurance: 16

GCA_000226255.2 (CAZyme)
CAZyme: CBM48
Occurance: 4

GCA_000226255.2 (CAZyme)
CAZyme: CBM13
Occurance: 2

GCA_000226255.2 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_000226255.2 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000226255.2 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000226255.2 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000226255.2 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000226255.2 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000226255.2 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000226255.2 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000226255.2 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000226255.2 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000226255.2 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000226255.2 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000226255.2 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000226255.2 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000226255.2 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000226255.2 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000226255.2 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000226255.2 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000226255.2 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_000226255.2 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000226255.2 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_000226255.2 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_000226255.2 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000226255.2 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000226255.2 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000226255.2 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000226255.2 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000226255.2 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000226255.2 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Metabolic module: M00364

GCA_000226255.2 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000226255.2 (Pathway)
Pathway: Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Metabolic module: M00527

GCA_000226255.2 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_000226255.2 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000226255.2 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_000226255.2 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000226255.2 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000226255.2 (Pathway)
Pathway: Heme biosynthesis, archaea, siroheme => heme
Metabolic module: M00847

GCA_000226255.2 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000226255.2 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_000226255.2 (Pathway)
Pathway: Menaquinone biosynthesis, futalosine pathway
Metabolic module: M00930

GCA_000226255.2 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000226255.2 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000226255.2 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000226255.2 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000226255.2 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000226255.2 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_000226255.2 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_000226255.2 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000226255.2 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_000226255.2 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000226255.2 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000226255.2 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000226255.2 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000226255.2 (Pathway)
Pathway: Tryptophan degradation
Metabolic module: MF0025

GCA_000226255.2 (Pathway)
Pathway: Tyrosine degradation II
Metabolic module: MF0027

GCA_000226255.2 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000226255.2 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_000226255.2 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000226255.2 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_000226255.2 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000226255.2 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000226255.2 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000226255.2 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000226255.2 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_000226255.2 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_000226255.2 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000226255.2 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000226255.2 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000226255.2 (Pathway)
Pathway: 4-aminobutyrate degradation
Metabolic module: MF0076

GCA_000226255.2 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000226255.2 (Pathway)
Pathway: Hydrogen metabolism
Metabolic module: MF0098

GCA_000226255.2 (Pathway)
Pathway: Nitrate reduction (dissimilatory)
Metabolic module: MF0101

GCA_000226255.2 (Pathway)
Pathway: Sulfate reduction (dissimilatory)
Metabolic module: MF0102

GCA_000226255.2 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.05

GCA_000226255.2 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.2
Relative abundance (%): 0.01

GCA_000226255.2 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_000226255.2 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.2
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_000226255.2 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.06

GCA_000226255.2 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 9
Relative abundance (%): 0.08

GCA_000226255.2 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 13.8
Relative abundance (%): 0.05

GCA_000226255.2 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1.2
Relative abundance (%): 0.03

GCA_000226255.2 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_000226255.2 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000226255.2 (MAGs)
MAGs: GCA_002425945.1_ASM242594v1_genomic.fna
Ecosystem: Generic

GCA_000226255.2 (MAGs)
MAGs: GCA_002432265.1_ASM243226v1_genomic.fna
Ecosystem: Generic