GCA_000224765.2
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Phenylobacterium deserti
Comparison to close relatives: Magnetococcus marinus
Comparison to close relatives: Aurantimonas coralicida
Comparison to close relatives: Mesorhizobium ephedrae
Comparison to close relatives: Devosia epidermidihirudinis
Comparison to close relatives: Aureimonas glaciistagni
Comparison to close relatives: Aurantimonas endophytica
Comparison to close relatives: Devosia chinhatensis
Comparison to close relatives: Mangrovicella endophytica
Comparison to close relatives: Nitratireductor alexandrii
Comparison to close relatives: Aurantimonas aggregata
Comparison to close relatives: Roseibium aestuarii
Comparison to close relatives: Oricola thermophila
Comparison to close relatives: Polymorphobacter multimanifer
Comparison to close relatives: Aureimonas flava
Comparison to close relatives: Komagataeibacter saccharivorans
Comparison to close relatives: Sandaracinobacter sibiricus
Comparison to close relatives: Methylobacterium goesingense
Comparison to close relatives: Ochrobactrum teleogrylli
Comparison to close relatives: Allorhizobium oryzae
Comparison to close relatives: Aureimonas jatrophae
Comparison to close relatives: Pannonibacter carbonis
Comparison to close relatives: Rhodothalassium salexigens
Comparison to close relatives: Aureimonas phyllosphaerae
Comparison to close relatives: Geomonas silvestris
Comparison to close relatives: Ochrobactrum soli
Comparison to close relatives: Trichlorobacter lovleyi
Comparison to close relatives: Oricola indica
Comparison to close relatives: Brucella haematophila
Comparison to close relatives: Phenylobacterium falsum
Comparison to close relatives: Brevundimonas aveniformis
Comparison to close relatives: Kaistia dalseonensis
Comparison to close relatives: Komagataeibacter europaeus
Comparison to close relatives: Sandarakinorhabdus cyanobacteriorum
Comparison to close relatives: Gluconacetobacter entanii
Comparison to close relatives: Phenylobacterium haematophilum
Comparison to close relatives: Phenylobacterium soli
Comparison to close relatives: Phenylobacterium conjunctum
Comparison to close relatives: Phenylobacterium lituiforme
Comparison to close relatives: Phenylobacterium terrae
Comparison to close relatives: Komagataeibacter hansenii
Comparison to close relatives: Komagataeibacter nataicola
Comparison to close relatives: Komagataeibacter sucrofermentans
Comparison to close relatives: Komagataeibacter xylinus
Comparison to close relatives: Polymorphobacter megasporae
Comparison to close relatives: Geobacter anodireducens
Comparison to close relatives: Geomobilimonas luticola
Comparison to close relatives: Allorhizobium vitis
Comparison to close relatives: Allorhizobium ampelinum
Comparison to close relatives: Consotaella salsifontis
Comparison to close relatives: Agrobacterium vitis
Comparison to close relatives: Aurantimonas manganoxydans
Comparison to close relatives: Acetobacter aceti
Comparison to close relatives: Novacetimonas hansenii
Comparison to close relatives: Xaviernesmea oryzae
Carbon source: starch
CAZyme: GH13
CAZyme: GH38
CAZyme: GH6
CAZyme: GH23
CAZyme: GH28
CAZyme: GH2
CAZyme: GH63
CAZyme: GH105
CAZyme: GH10
CAZyme: GH154
CAZyme: GH51
CAZyme: GH77
CAZyme: GH4
CAZyme: GH43
CAZyme: GH16
CAZyme: GH32
CAZyme: GH33
CAZyme: GH3
CAZyme: GH19
CAZyme: GH1

GCA_000224765.2 (CAZyme)
CAZyme: GH135
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GH102
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GH0
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GH130
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT51
Occurance: 3

GCA_000224765.2 (CAZyme)
CAZyme: GT4
Occurance: 18

GCA_000224765.2 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT1
Occurance: 6

GCA_000224765.2 (CAZyme)
CAZyme: GT66
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT2
Occurance: 20

GCA_000224765.2 (CAZyme)
CAZyme: GT0
Occurance: 6

GCA_000224765.2 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT28
Occurance: 3

GCA_000224765.2 (CAZyme)
CAZyme: GT30
Occurance: 2

GCA_000224765.2 (CAZyme)
CAZyme: GT9
Occurance: 4

GCA_000224765.2 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT11
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: PL12
Occurance: 2

GCA_000224765.2 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: PL22
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CE1
Occurance: 3

GCA_000224765.2 (CAZyme)
CAZyme: CE11
Occurance: 2

GCA_000224765.2 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CE9
Occurance: 2

GCA_000224765.2 (CAZyme)
CAZyme: CE12
Occurance: 3

GCA_000224765.2 (CAZyme)
CAZyme: CE4
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CE7
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CBM50
Occurance: 6

GCA_000224765.2 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CBM13
Occurance: 4

GCA_000224765.2 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CBM32
Occurance: 2

GCA_000224765.2 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_000224765.2 (CAZyme)
CAZyme: CBM57
Occurance: 1

GCA_000224765.2 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000224765.2 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000224765.2 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000224765.2 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000224765.2 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000224765.2 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000224765.2 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000224765.2 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000224765.2 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000224765.2 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000224765.2 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000224765.2 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000224765.2 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000224765.2 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000224765.2 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000224765.2 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000224765.2 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000224765.2 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000224765.2 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000224765.2 (Pathway)
Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
Metabolic module: M00535

GCA_000224765.2 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000224765.2 (Pathway)
Pathway: D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Metabolic module: M00552

GCA_000224765.2 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000224765.2 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000224765.2 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000224765.2 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_000224765.2 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_000224765.2 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000224765.2 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_000224765.2 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_000224765.2 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_000224765.2 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000224765.2 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000224765.2 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000224765.2 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000224765.2 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_000224765.2 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000224765.2 (Pathway)
Pathway: Urea degradation
Metabolic module: MF0085

GCA_000224765.2 (Pathway)
Pathway: Propionate production II
Metabolic module: MF0094

GCA_000224765.2 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1
Relative abundance (%): 0.02

GCA_000224765.2 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 10.4
Relative abundance (%): 0.08

GCA_000224765.2 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.01

GCA_000224765.2 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 28.4
Relative abundance (%): 0.12

GCA_000224765.2 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.01

GCA_000224765.2 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 1.2
Relative abundance (%): 0.14

GCA_000224765.2 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000224765.2 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000224765.2 (MAGs)
MAGs: no MAG matches found