GCA_000212915.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Bacteroides coprosuis
Comparison to close relatives: Bacteroides propionicifaciens
Comparison to close relatives: Bacteroides reticulotermitis
Comparison to close relatives: Bacteroides stercoris
Comparison to close relatives: Bacteroides nordii
Comparison to close relatives: Bacteroides intestinalis
Comparison to close relatives: Bacteroides salyersiae
Comparison to close relatives: Bacteroides graminisolvens
Comparison to close relatives: Bacteroides clarus
Comparison to close relatives: Bacteroides fragilis
Comparison to close relatives: Bacteroides caccae
Comparison to close relatives: Bacteroides cellulosilyticus
Comparison to close relatives: Bacteroides hominis
Comparison to close relatives: Bacteroides luti
Comparison to close relatives: Bacteroides acidifaciens
Comparison to close relatives: Bacteroides oleiciplenus
Comparison to close relatives: Bacteroides faecis
Comparison to close relatives: Bacteroides faecichinchillae
Comparison to close relatives: Bacteroides finegoldii
Comparison to close relatives: Bacteroides xylanisolvens
Comparison to close relatives: Bacteroides zhangwenhongii
Comparison to close relatives: Bacteroides eggerthii
Comparison to close relatives: Bacteroides thetaiotaomicron
Comparison to close relatives: Bacteroides luhongzhouii
Comparison to close relatives: Bacteroides caecimuris
Comparison to close relatives: Bacteroides gallinarum
Comparison to close relatives: Bacteroides uniformis
Comparison to close relatives: Bacteroides stercorirosoris
Comparison to close relatives: Bacteroides propionicigenes
Comparison to close relatives: Bacteroides rodentium
Comparison to close relatives: Bacteroides ovatus
Comparison to close relatives: Bacteroides faecium
Comparison to close relatives: Bacteroides pyogenes
Comparison to close relatives: Bacteroides humanifaecis
Comparison to close relatives: Bacteroides muris
Comparison to close relatives: Phocaeicola paurosaccharolyticus
Comparison to close relatives: Bacteroides faecalis
Comparison to close relatives: Phocaeicola faecicola
Comparison to close relatives: Fermentimonas caenicola
Comparison to close relatives: Phocaeicola vulgatus
Comparison to close relatives: Phocaeicola massiliensis
Comparison to close relatives: Phocaeicola plebeius
Comparison to close relatives: Phocaeicola sartorii
Comparison to close relatives: Phocaeicola dorei
Comparison to close relatives: Phocaeicola coprocola
Comparison to close relatives: Phocaeicola coprophilus
Comparison to close relatives: Phocaeicola fibrisolvens
Comparison to close relatives: Bacteroides zoogleoformans
Comparison to close relatives: Bacteroides helcogenes
Comparison to close relatives: Bacteroides cellulolyticus
Carbon source: starch
Carbon source: cellulose
CAZyme: GH13
CAZyme: GH2
CAZyme: GH35
CAZyme: GH3
CAZyme: GH77
CAZyme: GH6
CAZyme: GH20
CAZyme: GH9
CAZyme: GH95
CAZyme: GH92
CAZyme: GH97
CAZyme: GH89
CAZyme: GH65
CAZyme: GH163
CAZyme: GH133
CAZyme: GH63
CAZyme: GH28
CAZyme: GH29
CAZyme: GH123
CAZyme: GH110
CAZyme: GH33
CAZyme: GH10
CAZyme: GH31
CAZyme: GH101

GCA_000212915.1 (CAZyme)
CAZyme: GH0
Occurance: 6

GCA_000212915.1 (CAZyme)
CAZyme: GH125
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH30
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GH109
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH23
Occurance: 5

GCA_000212915.1 (CAZyme)
CAZyme: GH18
Occurance: 3

GCA_000212915.1 (CAZyme)
CAZyme: GH57
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH88
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH76
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GH105
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH16
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GH43
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH38
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH130
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH19
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GH73
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GH25
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT2
Occurance: 20

GCA_000212915.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT35
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT32
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GT51
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GT4
Occurance: 15

GCA_000212915.1 (CAZyme)
CAZyme: GT22
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT3
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT30
Occurance: 3

GCA_000212915.1 (CAZyme)
CAZyme: GT28
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT0
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GT9
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: GT8
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: PL15
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: PL12
Occurance: 3

GCA_000212915.1 (CAZyme)
CAZyme: PL13
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CE11
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: CE4
Occurance: 3

GCA_000212915.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CE3
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_000212915.1 (CAZyme)
CAZyme: CBM20
Occurance: 2

GCA_000212915.1 (CAZyme)
CAZyme: CBM50
Occurance: 13

GCA_000212915.1 (CAZyme)
CAZyme: CBM9
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM38
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM1
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000212915.1 (CAZyme)
CAZyme: CBM0
Occurance: 1

GCA_000212915.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_000212915.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000212915.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000212915.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000212915.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000212915.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000212915.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000212915.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000212915.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000212915.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000212915.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000212915.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000212915.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000212915.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000212915.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000212915.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000212915.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000212915.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000212915.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_000212915.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000212915.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000212915.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000212915.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000212915.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000212915.1 (Pathway)
Pathway: Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Metabolic module: M00123

GCA_000212915.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000212915.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000212915.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000212915.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000212915.1 (Pathway)
Pathway: Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Metabolic module: M00526

GCA_000212915.1 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_000212915.1 (Pathway)
Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
Metabolic module: M00535

GCA_000212915.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000212915.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000212915.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000212915.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000212915.1 (Pathway)
Pathway: Thiamine salvage pathway, HMP/HET => TMP
Metabolic module: M00899

GCA_000212915.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000212915.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000212915.1 (Pathway)
Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Metabolic module: M01016

GCA_000212915.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000212915.1 (Pathway)
Pathway: Pentose phosphate pathway (Pentose phosphate cycle)
Metabolic module: M00004

GCA_000212915.1 (Pathway)
Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Metabolic module: M00006

GCA_000212915.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000212915.1 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_000212915.1 (Pathway)
Pathway: Starch degradation
Metabolic module: MF0005

GCA_000212915.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_000212915.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000212915.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000212915.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_000212915.1 (Pathway)
Pathway: Glutamate degradation III
Metabolic module: MF0032

GCA_000212915.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000212915.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000212915.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000212915.1 (Pathway)
Pathway: Glutamine degradation I
Metabolic module: MF0046

GCA_000212915.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000212915.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000212915.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000212915.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_000212915.1 (Pathway)
Pathway: Glycerol degradation II
Metabolic module: MF0061

GCA_000212915.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_000212915.1 (Pathway)
Pathway: Pentose phosphate pathway (oxidative phase)
Metabolic module: MF0070

GCA_000212915.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000212915.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000212915.1 (Pathway)
Pathway: Pyruvate:formate lyase
Metabolic module: MF0074

GCA_000212915.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000212915.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_000212915.1 (Pathway)
Pathway: Nitrate reduction (dissimilatory)
Metabolic module: MF0101

GCA_000212915.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_000212915.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 2.2
Relative abundance (%): 0.08

GCA_000212915.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 3.4
Relative abundance (%): 0.14

GCA_000212915.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000212915.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.01

GCA_000212915.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 1.6
Relative abundance (%): 0.01

GCA_000212915.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_000212915.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000212915.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.01

GCA_000212915.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000212915.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.23

GCA_000212915.1 (MAGs)
MAGs: no MAG matches found