GCA_000205985.2
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Sedimenticola hydrogenitrophicus
Comparison to close relatives: Pseudomonas rustica
Comparison to close relatives: Marimicrobium arenosum
Comparison to close relatives: Neptunomonas qingdaonensis
Comparison to close relatives: Sedimenticola selenatireducens
Comparison to close relatives: Neptuniibacter victor
Comparison to close relatives: Pseudohongiella nitratireducens
Comparison to close relatives: Pseudomonas crudilactis
Comparison to close relatives: Spartinivicinus marinus
Comparison to close relatives: Kangiella japonica
Comparison to close relatives: Pseudomonas khorasanensis
Comparison to close relatives: Pseudomonas benzenivorans
Comparison to close relatives: Kangiella koreensis
Comparison to close relatives: Pseudomonas tensinigenes
Comparison to close relatives: Pseudomonas pergaminensis
Comparison to close relatives: Pseudomonas salmasensis
Comparison to close relatives: Spongiibacter tropicus
Comparison to close relatives: Pseudomonas azadiae
Comparison to close relatives: Pseudomonas iranensis
Comparison to close relatives: Pseudomonas atacamensis
Comparison to close relatives: Aestuariirhabdus litorea
Comparison to close relatives: Pseudomonas gozinkensis
Comparison to close relatives: Saccharophagus degradans
Comparison to close relatives: Kangiella aquimarina
Comparison to close relatives: Pseudomonas fitomaticsae
Comparison to close relatives: Pseudomonas allokribbensis
Comparison to close relatives: Pseudomonas azerbaijanoccidentalis
Comparison to close relatives: Kangiella profundi
Comparison to close relatives: Thiorhodospira sibirica
Comparison to close relatives: Kangiella geojedonensis
Comparison to close relatives: Motiliproteus coralliicola
Comparison to close relatives: Neptunomonas acidivorans
Comparison to close relatives: Maricurvus nonylphenolicus
Comparison to close relatives: Alkalimarinus alittae
Comparison to close relatives: Alkalimarinus sediminis
Comparison to close relatives: Kangiella shandongensis
Comparison to close relatives: Thalassolituus oleivorans
Comparison to close relatives: Alkalimarinus coralli
Comparison to close relatives: Oceaniserpentilla haliotis
Comparison to close relatives: Pseudomonas moraviensis
Comparison to close relatives: Bermanella marisrubri
Comparison to close relatives: Pseudomonas lactis
Comparison to close relatives: Acidihalobacter aeolianus
Comparison to close relatives: Kangiella sediminilitoris
Comparison to close relatives: Neptuniibacter caesariensis
Comparison to close relatives: Pseudomonas glycinae
Comparison to close relatives: Marinobacterium litorale
Comparison to close relatives: Marinobacterium aestuarii
Comparison to close relatives: Reinekea blandensis
Comparison to close relatives: Thiohalomonas nitratireducens
CAZyme: GH13
CAZyme: GH6
CAZyme: GH28
CAZyme: GH23
CAZyme: GH16
CAZyme: GH3
CAZyme: GH103
CAZyme: GH0
CAZyme: GH19
CAZyme: GH43
CAZyme: GH73
CAZyme: GH114
CAZyme: GT13
CAZyme: GT4
CAZyme: GT28
CAZyme: GT2
CAZyme: GT32
CAZyme: GT30
CAZyme: GT19
CAZyme: GT51
CAZyme: CE11
CAZyme: CBM50
CAZyme: CBM13
CAZyme: CBM5
CAZyme: CBM48
Pathway: PRPP biosynthesis, ribose 5P => PRPP

GCA_000205985.2 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000205985.2 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000205985.2 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000205985.2 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000205985.2 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000205985.2 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000205985.2 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000205985.2 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000205985.2 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000205985.2 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000205985.2 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000205985.2 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000205985.2 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000205985.2 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000205985.2 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_000205985.2 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000205985.2 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000205985.2 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000205985.2 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_000205985.2 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000205985.2 (Pathway)
Pathway: Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Metabolic module: M00572

GCA_000205985.2 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000205985.2 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000205985.2 (Pathway)
Pathway: Sulfide oxidation, sulfide => sulfur
Metabolic module: M00985

GCA_000205985.2 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000205985.2 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000205985.2 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000205985.2 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000205985.2 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000205985.2 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000205985.2 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000205985.2 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000205985.2 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000205985.2 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_000205985.2 (Pathway)
Pathway: Sulfate reduction (dissimilatory)
Metabolic module: MF0102

GCA_000205985.2 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.02

GCA_000205985.2 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.96

GCA_000205985.2 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000205985.2 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 9
Relative abundance (%): 2.17

GCA_000205985.2 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.5
Relative abundance (%): 0.13

GCA_000205985.2 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000205985.2 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.09

GCA_000205985.2 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 6.6
Relative abundance (%): 0.17

GCA_000205985.2 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000205985.2 (MAGs)
MAGs: 3300000148_7.fna
Ecosystem: Generic

GCA_000205985.2 (MAGs)
MAGs: 3300000238_6.fna
Ecosystem: Generic

GCA_000205985.2 (MAGs)
MAGs: 3300025668_41.fna
Ecosystem: Generic