GCA_000182945.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Fusobacterium hominis
Comparison to close relatives: Hypnocyclicus thermotrophus
Comparison to close relatives: Psychrilyobacter atlanticus
Comparison to close relatives: Fusobacterium gonidiaformans
Comparison to close relatives: Fusobacterium ulcerans
Comparison to close relatives: Filifactor alocis
Comparison to close relatives: Fusobacterium watanabei
Comparison to close relatives: Fusobacterium necrogenes
Comparison to close relatives: Fusobacterium animalis
Comparison to close relatives: Cetobacterium ceti
Comparison to close relatives: Fusobacterium nucleatum subsp. animalis
Comparison to close relatives: Anaeromicropila herbilytica
Comparison to close relatives: Fusobacterium periodonticum
Comparison to close relatives: Fusobacterium nucleatum subsp. nucleatum
Comparison to close relatives: Fusobacterium simiae
Comparison to close relatives: Fusobacterium necrophorum subsp. funduliforme
Comparison to close relatives: Fusobacterium naviforme
Comparison to close relatives: Cetobacterium somerae
Comparison to close relatives: Fusobacterium equinum
Comparison to close relatives: Faecalicatena fissicatena
Comparison to close relatives: Fusobacterium gastrosuis
Comparison to close relatives: Fusobacterium mortiferum
Comparison to close relatives: Fusobacterium vincentii
Comparison to close relatives: Faecalicatena contorta
Comparison to close relatives: Oceanivirga miroungae
Comparison to close relatives: Sebaldella termitidis
Comparison to close relatives: Pseudostreptobacillus hongkongensis
Comparison to close relatives: Propionigenium modestum
Comparison to close relatives: Anaerosporobacter faecicola
Comparison to close relatives: Streptobacillus felis
Comparison to close relatives: Fusobacterium russii
Comparison to close relatives: Streptobacillus ratti
Comparison to close relatives: Pseudoleptotrichia goodfellowii
Comparison to close relatives: Haliovirga abyssi
Comparison to close relatives: Streptobacillus notomytis
Comparison to close relatives: Streptobacillus canis
Comparison to close relatives: Fusobacterium varium
Comparison to close relatives: Fusobacterium nucleatum subsp. polymorphum
Comparison to close relatives: Sneathia sanguinegens
Comparison to close relatives: Caviibacter abscessus
Comparison to close relatives: Streptobacillus moniliformis
Comparison to close relatives: Sneathia vaginalis
Comparison to close relatives: Fusobacterium necrophorum subsp. necrophorum
Comparison to close relatives: Oceanivirga salmonicida
Comparison to close relatives: Propionigenium maris
Comparison to close relatives: Ilyobacter insuetus
Comparison to close relatives: Ilyobacter tartaricus
Comparison to close relatives: Ilyobacter polytropus
Comparison to close relatives: Fusobacterium canifelinum
Comparison to close relatives: Fusobacterium perfoetens
Comparison to close relatives: Fusobacterium nucleatum
Comparison to close relatives: Fusobacterium necrophorum
Carbon source: starch
CAZyme: GH26
CAZyme: GH13
CAZyme: GH6
CAZyme: GH28
CAZyme: GH77
CAZyme: GH4
CAZyme: GH0
CAZyme: GH19
CAZyme: GH38
CAZyme: GH43
CAZyme: GH23
CAZyme: GH73
CAZyme: GT2
CAZyme: GT13
CAZyme: GT35
CAZyme: GT51
CAZyme: GT30
CAZyme: GT32
CAZyme: GT4
CAZyme: GT83
CAZyme: GT41
CAZyme: GT5
CAZyme: GT28

GCA_000182945.1 (CAZyme)
CAZyme: GT9
Occurance: 5

GCA_000182945.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000182945.1 (CAZyme)
CAZyme: GT104
Occurance: 1

GCA_000182945.1 (CAZyme)
CAZyme: GT0
Occurance: 1

GCA_000182945.1 (CAZyme)
CAZyme: CE4
Occurance: 3

GCA_000182945.1 (CAZyme)
CAZyme: CE11
Occurance: 3

GCA_000182945.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_000182945.1 (CAZyme)
CAZyme: CBM50
Occurance: 3

GCA_000182945.1 (CAZyme)
CAZyme: CBM48
Occurance: 2

GCA_000182945.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_000182945.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_000182945.1 (Pathway)
Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Metabolic module: M00001

GCA_000182945.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000182945.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000182945.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000182945.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000182945.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000182945.1 (Pathway)
Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Metabolic module: M00064

GCA_000182945.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000182945.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000182945.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000182945.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000182945.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000182945.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000182945.1 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_000182945.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000182945.1 (Pathway)
Pathway: V/A-type ATPase, prokaryotes
Metabolic module: M00159

GCA_000182945.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000182945.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000182945.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000182945.1 (Pathway)
Pathway: Sulfur reduction, sulfur => sulfide
Metabolic module: M00986

GCA_000182945.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000182945.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000182945.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_000182945.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000182945.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000182945.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_000182945.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000182945.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000182945.1 (Pathway)
Pathway: Tyrosine degradation II
Metabolic module: MF0027

GCA_000182945.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000182945.1 (Pathway)
Pathway: Glutamine degradation I
Metabolic module: MF0046

GCA_000182945.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000182945.1 (Pathway)
Pathway: Threonine degradation I
Metabolic module: MF0049

GCA_000182945.1 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_000182945.1 (Pathway)
Pathway: Lysine degradation I
Metabolic module: MF0057

GCA_000182945.1 (Pathway)
Pathway: Glycolysis (pay-off phase)
Metabolic module: MF0068

GCA_000182945.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000182945.1 (Pathway)
Pathway: Pyruvate:formate lyase
Metabolic module: MF0074

GCA_000182945.1 (Pathway)
Pathway: Lactate consumption II
Metabolic module: MF0080

GCA_000182945.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000182945.1 (Pathway)
Pathway: Butyrate production II
Metabolic module: MF0089

GCA_000182945.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_000182945.1 (Pathway)
Pathway: Propionate production II
Metabolic module: MF0094

GCA_000182945.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 8.9
Relative abundance (%): 1.23

GCA_000182945.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 2.2
Relative abundance (%): 4.25

GCA_000182945.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 36.6
Relative abundance (%): 1.13

GCA_000182945.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 5.6
Relative abundance (%): 0.03

GCA_000182945.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 2.7
Relative abundance (%): 1.22

GCA_000182945.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 17.5
Relative abundance (%): 0.21

GCA_000182945.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 1.7
Relative abundance (%): 0.03

GCA_000182945.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 2.5
Relative abundance (%): 0.09

GCA_000182945.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 5.7
Relative abundance (%): 0.38

GCA_000182945.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 2.1
Relative abundance (%): 0.1

GCA_000182945.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 71.2
Relative abundance (%): 15.5

GCA_000182945.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 2.9
Relative abundance (%): 0.02

GCA_000182945.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 12
Relative abundance (%): 0.06

GCA_000182945.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 2.7
Relative abundance (%): 0.02

GCA_000182945.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 2.3
Relative abundance (%): 0.16

GCA_000182945.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 60.7
Relative abundance (%): 10.26

GCA_000182945.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 3.6
Relative abundance (%): 0.2

GCA_000182945.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 36.7
Relative abundance (%): 0.78

GCA_000182945.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 24.3
Relative abundance (%): 2.66

GCA_000182945.1 (MAGs)
MAGs: HMP_2012__SRS015947__bin_5.fa
Ecosystem: Human

GCA_000182945.1 (MAGs)
MAGs: CM_periimplantitis__SP_163SPI_T016__bin_2.fa
Ecosystem: Human

GCA_000182945.1 (MAGs)
MAGs: 3300011819_1.fna
Ecosystem: Generic