GCA_000174895.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Hominenteromicrobium mulieris
Comparison to close relatives: Eubacterium coprostanoligenes
Comparison to close relatives: Youxingia wuxianensis
Comparison to close relatives: Harryflintia acetispora
Comparison to close relatives: Ethanoligenens harbinense
Comparison to close relatives: Clostridium cellulosi
Comparison to close relatives: Merdimmobilis hominis
Comparison to close relatives: Ruminiclostridium cellobioparum subsp. termitidis
Comparison to close relatives: Ruminiclostridium cellobioparum subsp. cellobioparum
Comparison to close relatives: Ruminiclostridium papyrosolvens
Comparison to close relatives: Petroclostridium xylanilyticum
Comparison to close relatives: Agathobaculum ammoniilyticum
Comparison to close relatives: Thermocaproicibacter melissae
Comparison to close relatives: Flintibacter muris
Comparison to close relatives: Eubacterium siraeum
Comparison to close relatives: Solibaculum mannosilyticum
Comparison to close relatives: Acetivibrio cellulolyticus
Comparison to close relatives: Hydrogeniiclostridium hominis
Comparison to close relatives: Muriventricola aceti
Comparison to close relatives: Acetivibrio thermocellus
Comparison to close relatives: Fumia xinanensis
Comparison to close relatives: Flavonifractor plautii
Comparison to close relatives: Fournierella massiliensis
Comparison to close relatives: Massiliimalia timonensis
Comparison to close relatives: Zongyangia hominis
Comparison to close relatives: Ruthenibacterium lactatiformans
Comparison to close relatives: Intestinimonas butyriciproducens
Comparison to close relatives: Intestinimonas massiliensis
Comparison to close relatives: Acetivibrio aldrichii
Comparison to close relatives: Massiliimalia massiliensis
Comparison to close relatives: Anaerotruncus colihominis
Comparison to close relatives: Clostridium facile
Comparison to close relatives: Hydrogenoanaerobacterium saccharovorans
Comparison to close relatives: Huintestinicola butyrica
Comparison to close relatives: Caproicibacter fermentans
Comparison to close relatives: Clostridium methylpentosum
Comparison to close relatives: Paludihabitans psychrotolerans
Comparison to close relatives: Clostridium leptum
Comparison to close relatives: Hominimerdicola aceti
Comparison to close relatives: Tepidibaculum saccharolyticum
Comparison to close relatives: Faecalibacterium hattorii
Comparison to close relatives: Faecalibacterium duncaniae
Comparison to close relatives: Gemmiger formicilis
Comparison to close relatives: Gemmiger gallinarum
Comparison to close relatives: Ligaoa zhengdingensis
Comparison to close relatives: Acetanaerobacterium elongatum
Comparison to close relatives: Acutalibacter muris
Comparison to close relatives: Hydrogeniiclostridium mannosilyticum
Comparison to close relatives: Caproicibacterium amylolyticum
Comparison to close relatives: Oscillibacter valericigenes
Comparison to close relatives: Ruminiclostridium cellobioparum
Carbon source: starch
Carbon source: cellulose
CAZyme: GH10
CAZyme: GH11
CAZyme: GH2
CAZyme: GH43
CAZyme: GH13
CAZyme: GH97
CAZyme: GH146
CAZyme: GH9
CAZyme: GH30
CAZyme: GH26
CAZyme: GH141
CAZyme: GH5
CAZyme: GH0
CAZyme: GH74
CAZyme: GH16
CAZyme: GH6
CAZyme: GH48
CAZyme: GH94
CAZyme: GH3
CAZyme: GH44
CAZyme: GH95
CAZyme: GH31
CAZyme: GH53

GCA_000174895.1 (CAZyme)
CAZyme: GH42
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH28
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH25
Occurance: 8

GCA_000174895.1 (CAZyme)
CAZyme: GH36
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH124
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH77
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH18
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH105
Occurance: 3

GCA_000174895.1 (CAZyme)
CAZyme: GH130
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH38
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GH1
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: GH19
Occurance: 3

GCA_000174895.1 (CAZyme)
CAZyme: GH23
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GT2
Occurance: 23

GCA_000174895.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GT51
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GT35
Occurance: 3

GCA_000174895.1 (CAZyme)
CAZyme: GT4
Occurance: 28

GCA_000174895.1 (CAZyme)
CAZyme: GT5
Occurance: 4

GCA_000174895.1 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_000174895.1 (CAZyme)
CAZyme: GT1
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GT0
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GT14
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: GT8
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: PL1
Occurance: 7

GCA_000174895.1 (CAZyme)
CAZyme: PL9
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: PL11
Occurance: 5

GCA_000174895.1 (CAZyme)
CAZyme: CE1
Occurance: 8

GCA_000174895.1 (CAZyme)
CAZyme: CE12
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: CE15
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: CE3
Occurance: 3

GCA_000174895.1 (CAZyme)
CAZyme: CE2
Occurance: 3

GCA_000174895.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: CE0
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: CBM22
Occurance: 16

GCA_000174895.1 (CAZyme)
CAZyme: CBM37
Occurance: 30

GCA_000174895.1 (CAZyme)
CAZyme: CBM51
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: CBM6
Occurance: 4

GCA_000174895.1 (CAZyme)
CAZyme: CBM77
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: CBM35
Occurance: 11

GCA_000174895.1 (CAZyme)
CAZyme: CBM13
Occurance: 9

GCA_000174895.1 (CAZyme)
CAZyme: CBM4
Occurance: 7

GCA_000174895.1 (CAZyme)
CAZyme: CBM50
Occurance: 13

GCA_000174895.1 (CAZyme)
CAZyme: CBM3
Occurance: 7

GCA_000174895.1 (CAZyme)
CAZyme: CBM80
Occurance: 3

GCA_000174895.1 (CAZyme)
CAZyme: CBM79
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: CBM62
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: CBM76
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: CBM78
Occurance: 2

GCA_000174895.1 (CAZyme)
CAZyme: CBM75
Occurance: 1

GCA_000174895.1 (CAZyme)
CAZyme: CBM48
Occurance: 5

GCA_000174895.1 (CAZyme)
CAZyme: CBM5
Occurance: 3

GCA_000174895.1 (CAZyme)
CAZyme: CBM63
Occurance: 1

GCA_000174895.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000174895.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000174895.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000174895.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000174895.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000174895.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000174895.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000174895.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000174895.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000174895.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000174895.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000174895.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000174895.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000174895.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000174895.1 (Pathway)
Pathway: Phosphatidylcholine (PC) biosynthesis, PE => PC
Metabolic module: M00091

GCA_000174895.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000174895.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_000174895.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_000174895.1 (Pathway)
Pathway: NAD biosynthesis, aspartate => quinolinate => NAD
Metabolic module: M00115

GCA_000174895.1 (Pathway)
Pathway: Pantothenate biosynthesis, valine/L-aspartate => pantothenate
Metabolic module: M00119

GCA_000174895.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000174895.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000174895.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000174895.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000174895.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000174895.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000174895.1 (Pathway)
Pathway: C10-C20 isoprenoid biosynthesis, bacteria
Metabolic module: M00364

GCA_000174895.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000174895.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000174895.1 (Pathway)
Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Metabolic module: M00569

GCA_000174895.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000174895.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000174895.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000174895.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000174895.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000174895.1 (Pathway)
Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf
Metabolic module: M01004

GCA_000174895.1 (Pathway)
Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha
Metabolic module: M01018

GCA_000174895.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000174895.1 (Pathway)
Pathway: Glycogen degradation, glycogen => glucose-6P
Metabolic module: M00855

GCA_000174895.1 (Pathway)
Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch
Metabolic module: M00854

GCA_000174895.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000174895.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000174895.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000174895.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000174895.1 (Pathway)
Pathway: C1-unit interconversion, prokaryotes
Metabolic module: M00140

GCA_000174895.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_000174895.1 (Pathway)
Pathway: Lactose degradation
Metabolic module: MF0006

GCA_000174895.1 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_000174895.1 (Pathway)
Pathway: Fructose degradation
Metabolic module: MF0015

GCA_000174895.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000174895.1 (Pathway)
Pathway: Xylose degradation
Metabolic module: MF0021

GCA_000174895.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000174895.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000174895.1 (Pathway)
Pathway: Threonine degradation I
Metabolic module: MF0049

GCA_000174895.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000174895.1 (Pathway)
Pathway: Arginine degradation I
Metabolic module: MF0051

GCA_000174895.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000174895.1 (Pathway)
Pathway: Pyruvate:formate lyase
Metabolic module: MF0074

GCA_000174895.1 (Pathway)
Pathway: Urea degradation
Metabolic module: MF0085

GCA_000174895.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000174895.1 (Pathway)
Pathway: Ethanol production I
Metabolic module: MF0090

GCA_000174895.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_000174895.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 2.1
Relative abundance (%): 0.19

GCA_000174895.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 3.3
Relative abundance (%): 0.39

GCA_000174895.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0.6
Relative abundance (%): 0.67

GCA_000174895.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.6
Relative abundance (%): 0.01

GCA_000174895.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000174895.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 34.8
Relative abundance (%): 0.44

GCA_000174895.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 1
Relative abundance (%): 0.04

GCA_000174895.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.02

GCA_000174895.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_000174895.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.9
Relative abundance (%): 0.04

GCA_000174895.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_000174895.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 1.8
Relative abundance (%): 0.02

GCA_000174895.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 10.1
Relative abundance (%): 0.15

GCA_000174895.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 1.1
Relative abundance (%): 0.5

GCA_000174895.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.13

GCA_000174895.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000174895.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 47.1
Relative abundance (%): 0.92

GCA_000174895.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.19

GCA_000174895.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 7.2
Relative abundance (%): 0.28

GCA_000174895.1 (MAGs)
MAGs: 3300010270_7.fna
Ecosystem: Generic

GCA_000174895.1 (MAGs)
MAGs: 3300010282_2.fna
Ecosystem: Generic