GCA_000173115.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Cellulophaga lytica
Comparison to close relatives: Cellulophaga fucicola
Comparison to close relatives: Leeuwenhoekiella parthenopeia
Comparison to close relatives: Arenibacter palladensis
Comparison to close relatives: Pontimicrobium aquaticum
Comparison to close relatives: Algibacter pacificus
Comparison to close relatives: Mesoflavibacter zeaxanthinifaciens subsp. zeaxanthinifaciens
Comparison to close relatives: Robiginitalea biformata
Comparison to close relatives: Lentiprolixibacter aurantiacus
Comparison to close relatives: Algibacter psychrophilus
Comparison to close relatives: Aestuariibaculum scopimerae
Comparison to close relatives: Aquibacter zeaxanthinifaciens
Comparison to close relatives: Leeuwenhoekiella nanhaiensis
Comparison to close relatives: Yeosuana marina
Comparison to close relatives: Sediminicola luteus
Comparison to close relatives: Sediminicola arcticus
Comparison to close relatives: Gaetbulibacter marinus
Comparison to close relatives: Cellulophaga algicola
Comparison to close relatives: Cellulophaga pacifica
Comparison to close relatives: Leeuwenhoekiella blandensis
Comparison to close relatives: Joostella marina
Comparison to close relatives: Leeuwenhoekiella palythoae
Comparison to close relatives: Arenibacter aquaticus
Comparison to close relatives: Bizionia psychrotolerans
Comparison to close relatives: Robertkochia solimangrovi
Comparison to close relatives: Winogradskyella ludwigii
Comparison to close relatives: Winogradskyella sediminis
Comparison to close relatives: Winogradskyella schleiferi
Comparison to close relatives: Winogradskyella bathintestinalis
Comparison to close relatives: Maribacter caenipelagi
Comparison to close relatives: Maribacter thermophilus
Comparison to close relatives: Cellulophaga baltica
Comparison to close relatives: Hanstruepera ponticola
Comparison to close relatives: Arenibacter nanhaiticus
Comparison to close relatives: Pibocella ponti
Comparison to close relatives: Maribacter polysiphoniae
Comparison to close relatives: Bizionia argentinensis
Comparison to close relatives: Psychroserpens magnus
Comparison to close relatives: Maribacter arcticus
Comparison to close relatives: Formosa maritima
Comparison to close relatives: Formosa algae
Comparison to close relatives: Psychroserpens luteus
Comparison to close relatives: Mangrovimonas spongiae
Comparison to close relatives: Pseudalgibacter alginicilyticus
Comparison to close relatives: Bizionia echini
Comparison to close relatives: Leeuwenhoekiella aestuarii
Comparison to close relatives: Robiginitalea aestuariiviva
Comparison to close relatives: Bizionia hallyeonensis
Comparison to close relatives: Bizionia sediminis
Comparison to close relatives: Robiginitalea aurantiaca
Comparison to close relatives: Galbibacter orientalis
Comparison to close relatives: Mesoflavibacter zeaxanthinifaciens
Comparison to close relatives: Ichthyenterobacterium magnum
CAZyme: GH35
CAZyme: GH0
CAZyme: GH6
CAZyme: GH65
CAZyme: GH3
CAZyme: GH20
CAZyme: GH154
CAZyme: GH32
CAZyme: GH23
CAZyme: GH13
CAZyme: GH130
CAZyme: GH43
CAZyme: GH19
CAZyme: GH113
CAZyme: GH16
CAZyme: GH73
CAZyme: GH114
CAZyme: GT13
CAZyme: GT51
CAZyme: GT30
CAZyme: GT4
CAZyme: GT0
CAZyme: GT22

GCA_000173115.1 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: GT2
Occurance: 17

GCA_000173115.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: GT28
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: GT9
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: PL7
Occurance: 2

GCA_000173115.1 (CAZyme)
CAZyme: CE4
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CE11
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CE1
Occurance: 2

GCA_000173115.1 (CAZyme)
CAZyme: CE14
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CBM5
Occurance: 2

GCA_000173115.1 (CAZyme)
CAZyme: CBM9
Occurance: 2

GCA_000173115.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CBM35
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CBM50
Occurance: 5

GCA_000173115.1 (CAZyme)
CAZyme: CBM26
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_000173115.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000173115.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000173115.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000173115.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000173115.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000173115.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000173115.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000173115.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000173115.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000173115.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000173115.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000173115.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000173115.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000173115.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000173115.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_000173115.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000173115.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_000173115.1 (Pathway)
Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
Metabolic module: M00535

GCA_000173115.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000173115.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000173115.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000173115.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000173115.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000173115.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_000173115.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000173115.1 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_000173115.1 (Pathway)
Pathway: Fructan degradation
Metabolic module: MF0002

GCA_000173115.1 (Pathway)
Pathway: Maltose degradation
Metabolic module: MF0008

GCA_000173115.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000173115.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000173115.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000173115.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000173115.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000173115.1 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_000173115.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000173115.1 (Pathway)
Pathway: Succinate production
Metabolic module: MF0096

GCA_000173115.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1
Relative abundance (%): 0.01

GCA_000173115.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 4.4
Relative abundance (%): 0.55

GCA_000173115.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.05

GCA_000173115.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 15.6
Relative abundance (%): 0.94

GCA_000173115.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.84

GCA_000173115.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000173115.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000173115.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 4.9
Relative abundance (%): 3.62

GCA_000173115.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.04

GCA_000173115.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 2.4
Relative abundance (%): 0.01

GCA_000173115.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000173115.1 (MAGs)
MAGs: GCA_001439215.1_ASM143921v1_genomic.fna
Ecosystem: Baltic_sea

GCA_000173115.1 (MAGs)
MAGs: 20100303_Bin_86_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20100330_Bin_55_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20100408_Bin_78_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20100413_Bin_65_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20100420_Bin_66-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20100423_Bin_64-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20100504_Bin_108-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20100511_Bin_83_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110321_Bin_78_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110324_Bin_102_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110328_Bin_73_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110331_Bin_74_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110404_Bin_68_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110407_Bin_66_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110414_Bin_60_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110421_Bin_60_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110426_Bin_74_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110428_Bin_121_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110506_Bin_79_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110509_Bin_79-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110519_Bin_93_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110523_Bin_120_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110526_Bin_148_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20110530_Bin_104_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20120308_Bin_108_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20120405_Bin_126_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20120412_Bin_123_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20120416_Bin_96_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20120426_Bin_81_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20120503_Bin_103_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20120524_Bin_106_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20160321_Bin_27_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20160331_Bin_29_3-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20160412_Bin_77-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20160419_Bin_50_5-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20160512_Bin_68_1-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 20160517_Bin_75_2-contigs.fa
Ecosystem: North-sea_algael_bloom

GCA_000173115.1 (MAGs)
MAGs: 3300025620_23.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025632_16.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025666_23.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025668_27.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025680_15.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025685_17.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025690_22.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025705_28.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025809_42.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025821_23.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025830_23.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025832_22.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025869_37.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025880_50.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025890_51.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300025894_47.fna
Ecosystem: Generic

GCA_000173115.1 (MAGs)
MAGs: 3300027241_7.fna
Ecosystem: Generic