GCA_000171875.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Bizionia argentinensis
Comparison to close relatives: Formosa maritima
Comparison to close relatives: Lacinutrix iliipiscaria
Comparison to close relatives: Bizionia echini
Comparison to close relatives: Hanstruepera ponticola
Comparison to close relatives: Winogradskyella ouciana
Comparison to close relatives: Pontimicrobium aquaticum
Comparison to close relatives: Aestuariibaculum lutulentum
Comparison to close relatives: Winogradskyella ludwigii
Comparison to close relatives: Winogradskyella multivorans
Comparison to close relatives: Psychroserpens magnus
Comparison to close relatives: Winogradskyella bathintestinalis
Comparison to close relatives: Winogradskyella echinorum
Comparison to close relatives: Winogradskyella endarachnes
Comparison to close relatives: Winogradskyella crassostreae
Comparison to close relatives: Winogradskyella ursingii
Comparison to close relatives: Winogradskyella vidalii
Comparison to close relatives: Winogradskyella litoriviva
Comparison to close relatives: Psychroserpens luteolus
Comparison to close relatives: Winogradskyella poriferorum
Comparison to close relatives: Winogradskyella forsetii
Comparison to close relatives: Winogradskyella pocilloporae
Comparison to close relatives: Winogradskyella marina
Comparison to close relatives: Psychroserpens luteus
Comparison to close relatives: Winogradskyella costae
Comparison to close relatives: Winogradskyella algae
Comparison to close relatives: Winogradskyella helgolandensis
Comparison to close relatives: Winogradskyella sediminis
Comparison to close relatives: Winogradskyella pulchriflava
Comparison to close relatives: Winogradskyella profunda
Comparison to close relatives: Winogradskyella damuponensis
Comparison to close relatives: Winogradskyella eckloniae
Comparison to close relatives: Winogradskyella ulvae
Comparison to close relatives: Winogradskyella schleiferi
Comparison to close relatives: Winogradskyella rapida
Comparison to close relatives: Winogradskyella litorisediminis
Comparison to close relatives: Winogradskyella flava
Comparison to close relatives: Winogradskyella aurantiaca
Comparison to close relatives: Winogradskyella psychrotolerans
Comparison to close relatives: Winogradskyella aurantia
Comparison to close relatives: Winogradskyella exilis
Comparison to close relatives: Winogradskyella wichelsiae
Comparison to close relatives: Winogradskyella haliclonae
Comparison to close relatives: Winogradskyella arenosi
Comparison to close relatives: Winogradskyella wandonensis
Comparison to close relatives: Winogradskyella eximia
Comparison to close relatives: Yeosuana marina
Comparison to close relatives: Winogradskyella immobilis
Comparison to close relatives: Winogradskyella thalassocola
Comparison to close relatives: Winogradskyella jejuensis
Comparison to close relatives: Ichthyenterobacterium magnum
CAZyme: GH149
CAZyme: GH13
CAZyme: GH35
CAZyme: GH0
CAZyme: GH92
CAZyme: GH3
CAZyme: GH6
CAZyme: GH2
CAZyme: GH31
CAZyme: GH20
CAZyme: GH65
CAZyme: GH43
CAZyme: GH97
CAZyme: GH28
CAZyme: GH158
CAZyme: GH16
CAZyme: GH17
CAZyme: GH23
CAZyme: GH101
CAZyme: GH32
CAZyme: GH5
CAZyme: GH154
CAZyme: GH30
CAZyme: GH109
CAZyme: GH53

GCA_000171875.1 (CAZyme)
CAZyme: GH63
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: GH19
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: GH114
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GH1
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: GH113
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GH73
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT2
Occurance: 42

GCA_000171875.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT51
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: GT22
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: GT4
Occurance: 26

GCA_000171875.1 (CAZyme)
CAZyme: GT30
Occurance: 3

GCA_000171875.1 (CAZyme)
CAZyme: GT83
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT0
Occurance: 5

GCA_000171875.1 (CAZyme)
CAZyme: GT7
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT1
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT26
Occurance: 5

GCA_000171875.1 (CAZyme)
CAZyme: GT28
Occurance: 3

GCA_000171875.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT9
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: GT82
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: PL1
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: PL6
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: PL17
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: PL12
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: PL7
Occurance: 4

GCA_000171875.1 (CAZyme)
CAZyme: CE14
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: CE9
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CE11
Occurance: 3

GCA_000171875.1 (CAZyme)
CAZyme: CE4
Occurance: 4

GCA_000171875.1 (CAZyme)
CAZyme: CE0
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: CE2
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CE1
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM10
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM5
Occurance: 4

GCA_000171875.1 (CAZyme)
CAZyme: CBM9
Occurance: 5

GCA_000171875.1 (CAZyme)
CAZyme: CBM26
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM50
Occurance: 19

GCA_000171875.1 (CAZyme)
CAZyme: CBM48
Occurance: 3

GCA_000171875.1 (CAZyme)
CAZyme: CBM4
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM13
Occurance: 4

GCA_000171875.1 (CAZyme)
CAZyme: CBM20
Occurance: 4

GCA_000171875.1 (CAZyme)
CAZyme: CBM6
Occurance: 2

GCA_000171875.1 (CAZyme)
CAZyme: CBM32
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM35
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM16
Occurance: 1

GCA_000171875.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000171875.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000171875.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000171875.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000171875.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000171875.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000171875.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000171875.1 (Pathway)
Pathway: Methionine biosynthesis, aspartate => homoserine => methionine
Metabolic module: M00017

GCA_000171875.1 (Pathway)
Pathway: Threonine biosynthesis, aspartate => homoserine => threonine
Metabolic module: M00018

GCA_000171875.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000171875.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000171875.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000171875.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000171875.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000171875.1 (Pathway)
Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP
Metabolic module: M00049

GCA_000171875.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000171875.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000171875.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000171875.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000171875.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_000171875.1 (Pathway)
Pathway: Triacylglycerol biosynthesis
Metabolic module: M00089

GCA_000171875.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000171875.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000171875.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_000171875.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000171875.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_000171875.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000171875.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_000171875.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000171875.1 (Pathway)
Pathway: Cysteine biosynthesis, homocysteine + serine => cysteine
Metabolic module: M00338

GCA_000171875.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000171875.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000171875.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000171875.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000171875.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000171875.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000171875.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000171875.1 (Pathway)
Pathway: Proline metabolism
Metabolic module: M00972

GCA_000171875.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000171875.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000171875.1 (Pathway)
Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Metabolic module: M01036

GCA_000171875.1 (Pathway)
Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Metabolic module: M01045

GCA_000171875.1 (Pathway)
Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate
Metabolic module: M00045

GCA_000171875.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000171875.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000171875.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000171875.1 (Pathway)
Pathway: Tetrahydrofolate biosynthesis, GTP => THF
Metabolic module: M00126

GCA_000171875.1 (Pathway)
Pathway: Arabinoxylan degradation
Metabolic module: MF0001

GCA_000171875.1 (Pathway)
Pathway: Maltose degradation
Metabolic module: MF0008

GCA_000171875.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000171875.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000171875.1 (Pathway)
Pathway: Alanine degradation I
Metabolic module: MF0033

GCA_000171875.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000171875.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000171875.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000171875.1 (Pathway)
Pathway: Cysteine biosynthesis/homocysteine degradation
Metabolic module: MF0043

GCA_000171875.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000171875.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_000171875.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000171875.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000171875.1 (Pathway)
Pathway: Threonine degradation II
Metabolic module: MF0050

GCA_000171875.1 (Pathway)
Pathway: Histidine degradation
Metabolic module: MF0056

GCA_000171875.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000171875.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000171875.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_000171875.1 (Pathway)
Pathway: Lactate production
Metabolic module: MF0092

GCA_000171875.1 (Pathway)
Pathway: Succinate production
Metabolic module: MF0096

GCA_000171875.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.01

GCA_000171875.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000171875.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000171875.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1
Relative abundance (%): 0.26

GCA_000171875.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 31.6
Relative abundance (%): 0.74

GCA_000171875.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0

GCA_000171875.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000171875.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 15.1
Relative abundance (%): 0.3

GCA_000171875.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 7.4
Relative abundance (%): 2.87

GCA_000171875.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 1.4
Relative abundance (%): 0.02

GCA_000171875.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.07

GCA_000171875.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0.8
Relative abundance (%): 0.26

GCA_000171875.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 3.8
Relative abundance (%): 0.06

GCA_000171875.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 3.1
Relative abundance (%): 0.02

GCA_000171875.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 23.4
Relative abundance (%): 0.18

GCA_000171875.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000171875.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.14

GCA_000171875.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000171875.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.02

GCA_000171875.1 (MAGs)
MAGs: no MAG matches found