GCA_000163995.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Campylobacter jejuni subsp. jejuni
Comparison to close relatives: Campylobacter jejuni subsp. doylei
Comparison to close relatives: Campylobacter estrildidarum
Comparison to close relatives: Campylobacter subantarcticus
Comparison to close relatives: Campylobacter lari subsp. concheus
Comparison to close relatives: Campylobacter ornithocola
Comparison to close relatives: Campylobacter aviculae
Comparison to close relatives: Campylobacter taeniopygiae
Comparison to close relatives: Campylobacter insulaenigrae
Comparison to close relatives: Campylobacter bilis
Comparison to close relatives: Campylobacter hepaticus
Comparison to close relatives: Campylobacter volucris
Comparison to close relatives: Campylobacter armoricus
Comparison to close relatives: Campylobacter coli
Comparison to close relatives: Campylobacter lari subsp. lari
Comparison to close relatives: Campylobacter novaezeelandiae
Comparison to close relatives: Campylobacter peloridis
Comparison to close relatives: Campylobacter helveticus
Comparison to close relatives: Campylobacter magnus
Comparison to close relatives: Campylobacter vulpis
Comparison to close relatives: Campylobacter cuniculorum
Comparison to close relatives: Campylobacter upsaliensis
Comparison to close relatives: Campylobacter lanienae
Comparison to close relatives: Campylobacter iguaniorum
Comparison to close relatives: Campylobacter hyointestinalis subsp. lawsonii
Comparison to close relatives: Campylobacter avium
Comparison to close relatives: Campylobacter suis
Comparison to close relatives: Campylobacter fetus subsp. testudinum
Comparison to close relatives: Campylobacter majalis
Comparison to close relatives: Campylobacter fetus subsp. venerealis
Comparison to close relatives: Campylobacter hyointestinalis subsp. hyointestinalis
Comparison to close relatives: Campylobacter troglodytis
Comparison to close relatives: Campylobacter fetus subsp. fetus
Comparison to close relatives: Campylobacter mucosalis
Comparison to close relatives: Campylobacter blaseri
Comparison to close relatives: Campylobacter concisus
Comparison to close relatives: Campylobacter ureolyticus
Comparison to close relatives: Campylobacter pinnipediorum subsp. pinnipediorum
Comparison to close relatives: Campylobacter pinnipediorum subsp. caledonicus
Comparison to close relatives: Campylobacter rectus
Comparison to close relatives: Campylobacter canadensis
Comparison to close relatives: Campylobacter geochelonis
Comparison to close relatives: Campylobacter anatolicus
Comparison to close relatives: Campylobacter massiliensis
Comparison to close relatives: Campylobacter corcagiensis
Comparison to close relatives: Campylobacter portucalensis
Comparison to close relatives: Campylobacter hominis
Comparison to close relatives: Sulfurospirillum diekertiae
Comparison to close relatives: Sulfurospirillum tamanense
Comparison to close relatives: Sulfurospirillum deleyianum
Comparison to close relatives: Campylobacter jejuni
Comparison to close relatives: Campylobacter lari
Comparison to close relatives: Campylobacter hyointestinalis
Comparison to close relatives: Campylobacter sputorum
Comparison to close relatives: Campylobacter pinnipediorum
Comparison to close relatives: Campylobacter fetus
CAZyme: GH13
CAZyme: GH6
CAZyme: GH28
CAZyme: GH23
CAZyme: GH152
CAZyme: GH0
CAZyme: GH19
CAZyme: GH73
CAZyme: GT2
CAZyme: GT4
CAZyme: GT13
CAZyme: GT66
CAZyme: GT51
CAZyme: GT9
CAZyme: GT28
CAZyme: GT8
CAZyme: GT30
CAZyme: GT107
CAZyme: GT19
CAZyme: GT0

GCA_000163995.1 (CAZyme)
CAZyme: GT25
Occurance: 1

GCA_000163995.1 (CAZyme)
CAZyme: GT26
Occurance: 1

GCA_000163995.1 (CAZyme)
CAZyme: CE11
Occurance: 1

GCA_000163995.1 (CAZyme)
CAZyme: CBM47
Occurance: 1

GCA_000163995.1 (CAZyme)
CAZyme: CBM50
Occurance: 8

GCA_000163995.1 (CAZyme)
CAZyme: CBM13
Occurance: 1

GCA_000163995.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000163995.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000163995.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000163995.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000163995.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000163995.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000163995.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000163995.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000163995.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000163995.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000163995.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000163995.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000163995.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000163995.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000163995.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000163995.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000163995.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000163995.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000163995.1 (Pathway)
Pathway: CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolic module: M00063

GCA_000163995.1 (Pathway)
Pathway: ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Metabolic module: M00064

GCA_000163995.1 (Pathway)
Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Metabolic module: M00093

GCA_000163995.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000163995.1 (Pathway)
Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme
Metabolic module: M00121

GCA_000163995.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000163995.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_000163995.1 (Pathway)
Pathway: F-type ATPase, prokaryotes and chloroplasts
Metabolic module: M00157

GCA_000163995.1 (Pathway)
Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA
Metabolic module: M00307

GCA_000163995.1 (Pathway)
Pathway: Dissimilatory nitrate reduction, nitrate => ammonia
Metabolic module: M00530

GCA_000163995.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000163995.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000163995.1 (Pathway)
Pathway: Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
Metabolic module: M00579

GCA_000163995.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000163995.1 (Pathway)
Pathway: Menaquinone biosynthesis, modified futalosine pathway
Metabolic module: M00931

GCA_000163995.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000163995.1 (Pathway)
Pathway: PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Metabolic module: M00988

GCA_000163995.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000163995.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000163995.1 (Pathway)
Pathway: CMP-Pse5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-Pse5Ac7Ac
Metabolic module: M01007

GCA_000163995.1 (Pathway)
Pathway: CMP-Leg5Ac7Ac biosynthesis, UDP-BacNAc4NAc => CMP-Leg5Ac7Ac
Metabolic module: M01011

GCA_000163995.1 (Pathway)
Pathway: GDP-DDmanHep biosynthesis, sedoheptulose-7P => GDP-DDmanHep
Metabolic module: M01028

GCA_000163995.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000163995.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_000163995.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000163995.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000163995.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000163995.1 (Pathway)
Pathway: Aspartate degradation II
Metabolic module: MF0029

GCA_000163995.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000163995.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000163995.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000163995.1 (Pathway)
Pathway: Pyruvate:ferredoxin oxidoreductase
Metabolic module: MF0073

GCA_000163995.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000163995.1 (Pathway)
Pathway: Acetyl-CoA to acetate
Metabolic module: MF0086

GCA_000163995.1 (Pathway)
Pathway: Nitrate reduction (dissimilatory)
Metabolic module: MF0101

GCA_000163995.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 1
Relative abundance (%): 0

GCA_000163995.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.01

GCA_000163995.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000163995.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 1.2
Relative abundance (%): 0

GCA_000163995.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000163995.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 33.6
Relative abundance (%): 0.46

GCA_000163995.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 28.6
Relative abundance (%): 1.33

GCA_000163995.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000163995.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_000163995.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 0.4
Relative abundance (%): 0.01

GCA_000163995.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.17

GCA_000163995.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000163995.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 1
Relative abundance (%): 0.02

GCA_000163995.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.02

GCA_000163995.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.02

GCA_000163995.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.2
Relative abundance (%): 0.81

GCA_000163995.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 3.7
Relative abundance (%): 0.3

GCA_000163995.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.07

GCA_000163995.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 3.7
Relative abundance (%): 1.3

GCA_000163995.1 (MAGs)
MAGs: no MAG matches found