GCA_000156115.1
type: Item
Protologue of the species: no current description - please contribute here
Instance of: Genome Assembly Accession
GTDB: Bacteria
Comparison to close relatives: Planktotalea frisia
Comparison to close relatives: Planktotalea arctica
Comparison to close relatives: Planktotalea lamellibrachiae
Comparison to close relatives: Litoreibacter meonggei
Comparison to close relatives: Pelagicola litoralis
Comparison to close relatives: Shimia gijangensis
Comparison to close relatives: Ascidiaceihabitans donghaensis
Comparison to close relatives: Sulfitobacter marinus
Comparison to close relatives: Litoreibacter halocynthiae
Comparison to close relatives: Aliiroseovarius crassostreae
Comparison to close relatives: Litoreibacter janthinus
Comparison to close relatives: Litorivita pollutaquae
Comparison to close relatives: Sulfitobacter geojensis
Comparison to close relatives: Pacificibacter aestuarii
Comparison to close relatives: Sulfitobacter mediterraneus
Comparison to close relatives: Pacificibacter maritimus
Comparison to close relatives: Thalassobius gelatinovorus
Comparison to close relatives: Sulfitobacter noctilucae
Comparison to close relatives: Thalassobius mangrovi
Comparison to close relatives: Litoreibacter roseus
Comparison to close relatives: Pseudopuniceibacterium antarcticum
Comparison to close relatives: Litoreibacter albidus
Comparison to close relatives: Planktomarina temperata
Comparison to close relatives: Cognatishimia activa
Comparison to close relatives: Pseudopuniceibacterium sediminis
Comparison to close relatives: Antarcticimicrobium luteum
Comparison to close relatives: Roseobacter litoralis
Comparison to close relatives: Thalassobius autumnalis
Comparison to close relatives: Aliiroseovarius marinus
Comparison to close relatives: Lacimonas salitolerans
Comparison to close relatives: Octadecabacter antarcticus
Comparison to close relatives: Cochlodiniinecator piscidefendens
Comparison to close relatives: Pseudosulfitobacter pseudonitzschiae
Comparison to close relatives: Pacificibacter marinus
Comparison to close relatives: Thalassobius mediterraneus
Comparison to close relatives: Halocynthiibacter arcticus
Comparison to close relatives: Shimia biformata
Comparison to close relatives: Thiosulfatihalobacter marinus
Comparison to close relatives: Shimia marina
Comparison to close relatives: Shimia ponticola
Comparison to close relatives: Tropicibacter naphthalenivorans
Comparison to close relatives: Antarcticimicrobium sediminis
Comparison to close relatives: Actibacterium pelagium
Comparison to close relatives: Ruegeria lacuscaerulensis
Comparison to close relatives: Phaeobacter porticola
Comparison to close relatives: Litoreibacter arenae
Comparison to close relatives: Celeribacter neptunius
Comparison to close relatives: Phaeobacter piscinae
Comparison to close relatives: Yoonia maritima
Comparison to close relatives: Heliomarina baculiformis
Comparison to close relatives: Shimia litoralis
Comparison to close relatives: Pseudooceanicola sediminis
Comparison to close relatives: Aliiroseovarius lamellibrachiae
Comparison to close relatives: Thalassovita mangrovi
Comparison to close relatives: Thalassovita gelatinovora
Comparison to close relatives: Pseudooceanicola spongiae
Comparison to close relatives: Thalassovita mediterranea
Comparison to close relatives: Thalassovita autumnalis
Comparison to close relatives: Pseudooceanicola antarcticus
Comparison to close relatives: Falsihalocynthiibacter arcticus
CAZyme: GH23
CAZyme: GH13
CAZyme: GH6
CAZyme: GH36
CAZyme: GH28
CAZyme: GH24
CAZyme: GH42
CAZyme: GH10
CAZyme: GH0
CAZyme: GH20
CAZyme: GH101
CAZyme: GH105
CAZyme: GH103
CAZyme: GH1
CAZyme: GH35
CAZyme: GH135

GCA_000156115.1 (CAZyme)
CAZyme: GH16
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GH19
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GH3
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GH102
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GH43
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GH25
Occurance: 2

GCA_000156115.1 (CAZyme)
CAZyme: GH108
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT13
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT51
Occurance: 5

GCA_000156115.1 (CAZyme)
CAZyme: GT1
Occurance: 16

GCA_000156115.1 (CAZyme)
CAZyme: GT5
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT2
Occurance: 25

GCA_000156115.1 (CAZyme)
CAZyme: GT107
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT4
Occurance: 15

GCA_000156115.1 (CAZyme)
CAZyme: GT14
Occurance: 2

GCA_000156115.1 (CAZyme)
CAZyme: GT28
Occurance: 4

GCA_000156115.1 (CAZyme)
CAZyme: GT7
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT30
Occurance: 2

GCA_000156115.1 (CAZyme)
CAZyme: GT19
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT9
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT61
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT32
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT20
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: GT26
Occurance: 2

GCA_000156115.1 (CAZyme)
CAZyme: PL0
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CE9
Occurance: 2

GCA_000156115.1 (CAZyme)
CAZyme: CE11
Occurance: 2

GCA_000156115.1 (CAZyme)
CAZyme: CE4
Occurance: 2

GCA_000156115.1 (CAZyme)
CAZyme: CE12
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM2
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM20
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM50
Occurance: 15

GCA_000156115.1 (CAZyme)
CAZyme: CBM13
Occurance: 3

GCA_000156115.1 (CAZyme)
CAZyme: CBM56
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM6
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM5
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM51
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM48
Occurance: 1

GCA_000156115.1 (CAZyme)
CAZyme: CBM57
Occurance: 1

GCA_000156115.1 (Pathway)
Pathway: Glycolysis, core module involving three-carbon compounds
Metabolic module: M00002

GCA_000156115.1 (Pathway)
Pathway: Gluconeogenesis, oxaloacetate => fructose-6P
Metabolic module: M00003

GCA_000156115.1 (Pathway)
Pathway: PRPP biosynthesis, ribose 5P => PRPP
Metabolic module: M00005

GCA_000156115.1 (Pathway)
Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Metabolic module: M00007

GCA_000156115.1 (Pathway)
Pathway: Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Metabolic module: M00008

GCA_000156115.1 (Pathway)
Pathway: Citrate cycle (TCA cycle, Krebs cycle)
Metabolic module: M00009

GCA_000156115.1 (Pathway)
Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Metabolic module: M00010

GCA_000156115.1 (Pathway)
Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Metabolic module: M00011

GCA_000156115.1 (Pathway)
Pathway: Proline biosynthesis, glutamate => proline
Metabolic module: M00015

GCA_000156115.1 (Pathway)
Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Metabolic module: M00016

GCA_000156115.1 (Pathway)
Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Metabolic module: M00019

GCA_000156115.1 (Pathway)
Pathway: Serine biosynthesis, glycerate-3P => serine
Metabolic module: M00020

GCA_000156115.1 (Pathway)
Pathway: Cysteine biosynthesis, serine => cysteine
Metabolic module: M00021

GCA_000156115.1 (Pathway)
Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Metabolic module: M00024

GCA_000156115.1 (Pathway)
Pathway: Ornithine biosynthesis, glutamate => ornithine
Metabolic module: M00028

GCA_000156115.1 (Pathway)
Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Metabolic module: M00040

GCA_000156115.1 (Pathway)
Pathway: Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Metabolic module: M00046

GCA_000156115.1 (Pathway)
Pathway: Guanine ribonucleotide biosynthesis, IMP => GDP, GTP
Metabolic module: M00050

GCA_000156115.1 (Pathway)
Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP
Metabolic module: M00052

GCA_000156115.1 (Pathway)
Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Metabolic module: M00053

GCA_000156115.1 (Pathway)
Pathway: beta-Oxidation, acyl-CoA synthesis
Metabolic module: M00086

GCA_000156115.1 (Pathway)
Pathway: C5 isoprenoid biosynthesis, non-mevalonate pathway
Metabolic module: M00096

GCA_000156115.1 (Pathway)
Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Metabolic module: M00097

GCA_000156115.1 (Pathway)
Pathway: Acylglycerol degradation
Metabolic module: M00098

GCA_000156115.1 (Pathway)
Pathway: Glutathione biosynthesis, glutamate => glutathione
Metabolic module: M00118

GCA_000156115.1 (Pathway)
Pathway: Coenzyme A biosynthesis, pantothenate => CoA
Metabolic module: M00120

GCA_000156115.1 (Pathway)
Pathway: Cobalamin biosynthesis, cobyrinate a, c-diamide => cobalamin
Metabolic module: M00122

GCA_000156115.1 (Pathway)
Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Metabolic module: M00125

GCA_000156115.1 (Pathway)
Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine
Metabolic module: M00134

GCA_000156115.1 (Pathway)
Pathway: Cytochrome bc1 complex respiratory unit
Metabolic module: M00151

GCA_000156115.1 (Pathway)
Pathway: Cytochrome c oxidase, cbb3-type
Metabolic module: M00156

GCA_000156115.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), dark
Metabolic module: M00168

GCA_000156115.1 (Pathway)
Pathway: CAM (Crassulacean acid metabolism), light
Metabolic module: M00169

GCA_000156115.1 (Pathway)
Pathway: Ethylmalonyl pathway
Metabolic module: M00373

GCA_000156115.1 (Pathway)
Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Metabolic module: M00432

GCA_000156115.1 (Pathway)
Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc
Metabolic module: M00549

GCA_000156115.1 (Pathway)
Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Metabolic module: M00569

GCA_000156115.1 (Pathway)
Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Metabolic module: M00570

GCA_000156115.1 (Pathway)
Pathway: Anoxygenic photosystem II
Metabolic module: M00597

GCA_000156115.1 (Pathway)
Pathway: Glycine cleavage system
Metabolic module: M00621

GCA_000156115.1 (Pathway)
Pathway: Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Metabolic module: M00741

GCA_000156115.1 (Pathway)
Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Metabolic module: M00793

GCA_000156115.1 (Pathway)
Pathway: Arginine biosynthesis, ornithine => arginine
Metabolic module: M00844

GCA_000156115.1 (Pathway)
Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
Metabolic module: M00881

GCA_000156115.1 (Pathway)
Pathway: Proline degradation, proline => glutamate
Metabolic module: M00970

GCA_000156115.1 (Pathway)
Pathway: Dimethylsulfoniopropionate (DMSP) degradation, demethylation pathway, DMSP => methanethiol
Metabolic module: M00990

GCA_000156115.1 (Pathway)
Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
Metabolic module: M00995

GCA_000156115.1 (Pathway)
Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Metabolic module: M00999

GCA_000156115.1 (Pathway)
Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man
Metabolic module: M01000

GCA_000156115.1 (Pathway)
Pathway: UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Metabolic module: M01009

GCA_000156115.1 (Pathway)
Pathway: Spirilloxanthin biosynthesis, lycopene => spirilloxanthin
Metabolic module: M01039

GCA_000156115.1 (Pathway)
Pathway: Guanine ribonucleotide degradation, GMP => Urate
Metabolic module: M00959

GCA_000156115.1 (Pathway)
Pathway: Adenine ribonucleotide degradation, AMP => Urate
Metabolic module: M00958

GCA_000156115.1 (Pathway)
Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
Metabolic module: M00909

GCA_000156115.1 (Pathway)
Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Metabolic module: M00880

GCA_000156115.1 (Pathway)
Pathway: Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a, c-diamide
Metabolic module: M00924

GCA_000156115.1 (Pathway)
Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Metabolic module: M00022

GCA_000156115.1 (Pathway)
Pathway: Tryptophan biosynthesis, chorismate => tryptophan
Metabolic module: M00023

GCA_000156115.1 (Pathway)
Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP
Metabolic module: M00048

GCA_000156115.1 (Pathway)
Pathway: Fatty acid biosynthesis, initiation
Metabolic module: M00082

GCA_000156115.1 (Pathway)
Pathway: Fatty acid biosynthesis, elongation
Metabolic module: M00083

GCA_000156115.1 (Pathway)
Pathway: C1-unit interconversion, prokaryotes
Metabolic module: M00140

GCA_000156115.1 (Pathway)
Pathway: Melibiose degradation
Metabolic module: MF0009

GCA_000156115.1 (Pathway)
Pathway: Mannose degradation
Metabolic module: MF0018

GCA_000156115.1 (Pathway)
Pathway: Xylose degradation
Metabolic module: MF0021

GCA_000156115.1 (Pathway)
Pathway: Aspartate degradation I
Metabolic module: MF0028

GCA_000156115.1 (Pathway)
Pathway: Alanine degradation II
Metabolic module: MF0034

GCA_000156115.1 (Pathway)
Pathway: Glycine degradation
Metabolic module: MF0035

GCA_000156115.1 (Pathway)
Pathway: Isoleucine degradation
Metabolic module: MF0036

GCA_000156115.1 (Pathway)
Pathway: Leucine degradation
Metabolic module: MF0037

GCA_000156115.1 (Pathway)
Pathway: Methionine degradation I
Metabolic module: MF0038

GCA_000156115.1 (Pathway)
Pathway: Proline degradation
Metabolic module: MF0040

GCA_000156115.1 (Pathway)
Pathway: Cysteine degradation I
Metabolic module: MF0044

GCA_000156115.1 (Pathway)
Pathway: Cysteine degradation II
Metabolic module: MF0045

GCA_000156115.1 (Pathway)
Pathway: Glutamine degradation II
Metabolic module: MF0047

GCA_000156115.1 (Pathway)
Pathway: Serine degradation
Metabolic module: MF0048

GCA_000156115.1 (Pathway)
Pathway: Arginine degradation IV
Metabolic module: MF0054

GCA_000156115.1 (Pathway)
Pathway: Entner-Doudoroff pathway
Metabolic module: MF0066

GCA_000156115.1 (Pathway)
Pathway: NADH:ferredoxin oxidoreductase
Metabolic module: MF0069

GCA_000156115.1 (Pathway)
Pathway: Pentose phosphate pathway (non-oxidative branch)
Metabolic module: MF0071

GCA_000156115.1 (Pathway)
Pathway: Pyruvate dehydrogenase complex
Metabolic module: MF0072

GCA_000156115.1 (Pathway)
Pathway: Acetate to acetyl-CoA
Metabolic module: MF0075

GCA_000156115.1 (Pathway)
Pathway: Lactate consumption I
Metabolic module: MF0079

GCA_000156115.1 (Pathway)
Pathway: Acetyl-CoA to crotonyl-CoA
Metabolic module: MF0087

GCA_000156115.1 (Pathway)
Pathway: Succinate production
Metabolic module: MF0096

GCA_000156115.1 (Ecosystem)
Ecosystem: insect gut metagenome
Prevalence (%): 0.8
Relative abundance (%): 0

GCA_000156115.1 (Ecosystem)
Ecosystem: mouse gut metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_000156115.1 (Ecosystem)
Ecosystem: human vaginal metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000156115.1 (Ecosystem)
Ecosystem: freshwater metagenome
Prevalence (%): 3.5
Relative abundance (%): 0.79

GCA_000156115.1 (Ecosystem)
Ecosystem: coral metagenome
Prevalence (%): 44.8
Relative abundance (%): 3.99

GCA_000156115.1 (Ecosystem)
Ecosystem: pig gut metagenome
Prevalence (%): 1.9
Relative abundance (%): 0.01

GCA_000156115.1 (Ecosystem)
Ecosystem: chicken gut metagenome
Prevalence (%): 0.7
Relative abundance (%): 0.16

GCA_000156115.1 (Ecosystem)
Ecosystem: marine metagenome
Prevalence (%): 28.4
Relative abundance (%): 2.49

GCA_000156115.1 (Ecosystem)
Ecosystem: plant metagenome
Prevalence (%): 3.9
Relative abundance (%): 0.69

GCA_000156115.1 (Ecosystem)
Ecosystem: soil metagenome
Prevalence (%): 2.6
Relative abundance (%): 0.13

GCA_000156115.1 (Ecosystem)
Ecosystem: human oral metagenome
Prevalence (%): 0
Relative abundance (%): 0

GCA_000156115.1 (Ecosystem)
Ecosystem: activated sludge metagenome
Prevalence (%): 5.9
Relative abundance (%): 0.37

GCA_000156115.1 (Ecosystem)
Ecosystem: wastewater metagenome
Prevalence (%): 4.4
Relative abundance (%): 0.38

GCA_000156115.1 (Ecosystem)
Ecosystem: rhizosphere metagenome
Prevalence (%): 6.4
Relative abundance (%): 0.08

GCA_000156115.1 (Ecosystem)
Ecosystem: marine sediment metagenome
Prevalence (%): 25.6
Relative abundance (%): 0.32

GCA_000156115.1 (Ecosystem)
Ecosystem: human lung metagenome
Prevalence (%): 0.4
Relative abundance (%): 0

GCA_000156115.1 (Ecosystem)
Ecosystem: bovine gut metagenome
Prevalence (%): 0.3
Relative abundance (%): 0

GCA_000156115.1 (Ecosystem)
Ecosystem: human skin metagenome
Prevalence (%): 0.3
Relative abundance (%): 0.46

GCA_000156115.1 (Ecosystem)
Ecosystem: human gut metagenome
Prevalence (%): 0.1
Relative abundance (%): 0.01

GCA_000156115.1 (MAGs)
MAGs: 3300000930_8.fna
Ecosystem: Generic